Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1504 ATGGAAAGGGCACCAACGTTGAATCTATCCTTACGCTTTGGTCTTGTTCTCTTCCAACTTCTCCTTCAAGTTCGCAGCGCCACCAACGACCCCAATCCTGGATTCATAAGCATTGATTGTGGAGCAACTCATGACTACATGTACGAGGAAACGGGCATATGTTCCGCCACACACAGCAGGTACAGGGATGACATCTATGATCTAAATGCTATCATGAATATCAAAGACACATACAAGATCTCCAATTTGGATTGGCAAGGAGATCCATGTGTTTCAAGACTTGCTTGGGATGGACTAAACTGTAGTTCTGGTATAAATGGTAACAATGCAAGGATCACCTCAGTGAACCTAAGCGTGACCAACTTGGCTGGGCAAATAACTATCTCTTTTTCACAACTTACAGAGTTAGAGTCATTAGATTTATCATTCAATGATTTGTCCGGATCCGTACCTGAATTTCTAGCTGAACTACCAAAATTGAGAGTCCTTAACTTGACTGGCAACAAGCTCACAGGTTCCATTCCCAACGCTCTCAAGGAAAAGGCAGATTTGCACTTGAGTTTGGAGGATAATCCGGGTCTTTGTCTGGTGGATTCATGCAAAAACAAGAAGATTGTCATTCCAATTGTTGCTTCTGTTTCTGCTTTAGTTGCAGGCCTCTTGGTTTGTCTAGGAATATGGATCTTCAAAACCAAGAAATTAAAAGTGTTATTCTGTTTACTTTCTCAATCATCAGTGCAAGGTTTCAGAGAATTTCGATCTGAGGTAGAACTCTTAGTGGTTATTCATCATAGACATTTGGTATCTCTGATTGGATACTGTGAAGAAGGTAGTGTGAGGGCATTAATTTATGAATATATGGCTAATGGAAATCTTCAACAACATTTATCAAAAGAGAACCCTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCTGCACATGGATTGGACTATTTGCATAATGGTTGTAAGCCGGCAATAATTCATAGAGACTTGAAGACTTCTAACATTTTACTAAATGAAAACATGCAAGCCAAGATTTCTGACTTTGGATTATCTCGAGCTTTTGCAAATGATATAGACACTCATGTGACAACTCGTCCAGCTGGCACACCGGGTTACCTTGATCCTGAATTCCAAAGTTCTGGAAACCTGACTAAAAAGAGCGATGTTTATAGCTTTGGAATAATTTTGCTTGAGCTAGTCACGGGTAAACCTGTATTAAGAAGAGAACTCGGCACGGTTTATTACATTCTGAATTGGGTTACCCCTAAACTTGAAATGGGAGATATCCAATCTATCGTAGATCCAAAGTTAGAAGGAAATTACAGCACTAATTCAGCTTGGAAATTATTAGAGATAGCTATGTCTTGTACTGCACCGTCTGGAGTTGAAAGGCCTGACATAAGTCATGTGGTAGCTGAACTAAGGGAATGTTTGGCTATGACCAAAACCATGCGGAGGGACTCTACCAGTGATTTGGAAATGGCTTCTTTGGTGTCTGATTCAGGCCTTATTCCATATGCCCGATAG 1545 0.4032 MERAPTLNLSLRFGLVLFQLLLQVRSATNDPNPGFISIDCGATHDYMYEETGICSATHSRYRDDIYDLNAIMNIKDTYKISNLDWQGDPCVSRLAWDGLNCSSGINGNNARITSVNLSVTNLAGQITISFSQLTELESLDLSFNDLSGSVPEFLAELPKLRVLNLTGNKLTGSIPNALKEKADLHLSLEDNPGLCLVDSCKNKKIVIPIVASVSALVAGLLVCLGIWIFKTKKLKVLFCLLSQSSVQGFREFRSEVELLVVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQQHLSKENPNVLKWNERLQIALDAAHGLDYLHNGCKPAIIHRDLKTSNILLNENMQAKISDFGLSRAFANDIDTHVTTRPAGTPGYLDPEFQSSGNLTKKSDVYSFGIILLELVTGKPVLRRELGTVYYILNWVTPKLEMGDIQSIVDPKLEGNYSTNSAWKLLEIAMSCTAPSGVERPDISHVVAELRECLAMTKTMRRDSTSDLEMASLVSDSGLIPYAR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1504 514 PANTHER OS07G0107800 PROTEIN-RELATED 64 484 - -
Acco09g1504 514 Gene3D Ribonuclease Inhibitor 67 194 IPR032675 -
Acco09g1504 514 Gene3D Transferase(Phosphotransferase) domain 1 288 507 - -
Acco09g1504 514 PRINTS Leucine-rich repeat signature 157 170 - -
Acco09g1504 514 PRINTS Leucine-rich repeat signature 136 149 - -
Acco09g1504 514 Gene3D Phosphorylase Kinase; domain 1 228 287 - -
Acco09g1504 514 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 287 493 - -
Acco09g1504 514 ProSiteProfiles Leucine-rich repeat profile. 159 181 IPR001611 GO:0005515
Acco09g1504 514 SUPERFAMILY Protein kinase-like (PK-like) 242 480 IPR011009 -
Acco09g1504 514 SMART serkin_6 222 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1504 514 ProSiteProfiles Protein kinase domain profile. 160 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1504 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Acco09g1504 514 SUPERFAMILY L domain-like 106 184 - -
Acco09g1504 514 FunFam Leucine-rich repeat receptor-like kinase 66 196 - -
Acco09g1504 514 Pfam Protein tyrosine and serine/threonine kinase 230 480 IPR001245 GO:0004672|GO:0006468
Acco09g1504 514 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1504 Acco-ChrAcco09 30826402 30831731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1504 67 493 Receptor kinase-like Gene Family AT1G07560 45.175 9.95e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1504 PK_Tyr_Ser-Thr 1e-41 CL0016