Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1500 ATGGGGAAGGCTTCTAGGTGGTTGAAGGGCTTGTTGGGGATGAAGAAAGAGAAGGACTACCACCACCGCATCGGCATCGACAATTCTGGCTCATTGGTTTCTTCTGACAAGAAAGAAAAGAAACGATGGAGTTTTGCTAAGTCAGGCAAAGATTCCGAATCTGGAACAACTAGTCAACCTCGTTTTCCTCCTCCTGATTCCGCTTCGTATAGATCCTATAATATGTCGGAAACAGAGAAAGAGCAGAACAAGCACGCAATTGCTGTCGCCGCCGCAACCGCCGCAGCTGCAGATGCTGCTGTCGCCGCCGCTCAGGCAGCTGTCGCGGTGGTGAGGCTCACCAGCCAGGGAAGAGGCACTCTGTTTAGTGGCAGTAGAGGAAAATGGGCGGCAGTTAAAATTCAAACCGTTTTCAGAGGCTACTTGGCGAGGAAGGCTCTAAGAGCATTGAAAGGATTAGTTAAGATTCAAGCACTGGTACGAGGTTTTCTTGTTCGAAAGCGAGCTACAGCAACTCTCCACAGCATGCAAGCTCTGATCAGAGCTCAGGCTTCAGCTCGATCACAGAGAGCTCGTCGGTCCATTAGCAAAGCTAGAAAATCAATGGATCGAGTTGATGAAACAAGAACGTCCATCGGAGCAATTGGAGAGGAGGATGGTGCCCTTGTAAGTGTGAACAGTGTGGACGAGTTGGTATTTGGCACAACAGCGGTCGGCGGGGCAGTTGGAGAGGAGGATGATGCCCTTGTGGATGCAGACGAGCTACTACTTGACACAGCGACGGTTGGTGGAGTGGCTGTAGAGGAGGATGGTGGCTCTTGTGGGTCCAAGGACAATTTAGTCAGGAATTGA 852 0.507 MGKASRWLKGLLGMKKEKDYHHRIGIDNSGSLVSSDKKEKKRWSFAKSGKDSESGTTSQPRFPPPDSASYRSYNMSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSRGKWAAVKIQTVFRGYLARKALRALKGLVKIQALVRGFLVRKRATATLHSMQALIRAQASARSQRARRSISKARKSMDRVDETRTSIGAIGEEDGALVSVNSVDELVFGTTAVGGAVGEEDDALVDADELLLDTATVGGVAVEEDGGSCGSKDNLVRN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1500 283 MobiDBLite consensus disorder prediction 33 48 - -
Acco09g1500 283 Gene3D - 68 152 - -
Acco09g1500 283 MobiDBLite consensus disorder prediction 19 76 - -
Acco09g1500 283 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Acco09g1500 283 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Acco09g1500 283 Pfam IQ calmodulin-binding motif 154 168 IPR000048 GO:0005515
Acco09g1500 283 SMART iq_5 149 170 IPR000048 GO:0005515
Acco09g1500 283 SMART iq_5 126 148 IPR000048 GO:0005515
Acco09g1500 283 ProSiteProfiles IQ motif profile. 175 204 IPR000048 GO:0005515
Acco09g1500 283 PANTHER IQ-DOMAIN 5-RELATED 1 201 - -
Acco09g1500 283 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Acco09g1500 283 MobiDBLite consensus disorder prediction 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1500 Acco-ChrAcco09 30766921 30769881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1500 1 230 IQD Protein Family AT3G16490 53.814 5.69e-48 162