Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1496 ATGAATGGTAGGTCAAGAAACGAGGAGGTGTCTCCTCAGCTGCTAGATTTGATACCAAAAGACCGAGAGTGGCATGAAAACAGAGCCCACAAGTTTTCAGAAGAAAGGAAACTTGAGCTCAGACTTGGTCCACCTGGTGAAGAAGAAGACGACGTCATTAGGGGAAGAAACGAATCTCTGCTCTCTCTTGGTTACTTCTCAGCCTCCGTTAATGGAGGTCACACCCAGAAACCTGTGTCTTCTCCTTGGGCTTCTTCTTCGAAGACTCAGAACATTAATCAACACAAAGGGGTTTCAGTTTCATCATCATTCCTACAGCCTCAACCCTCTCCTCCAGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTAGTGGGGTGGCCTCCAATTCGCTCATTTAGGAAGAACCTTGCAAGTAGTAGCACTTCCAAGGTTGTTTCTCAACACGAGTCTCAGAATCATCAGCAGCACGTGGTTGTTGAAGATAAGGTTGCTGGGAAAAAACCTGTGGCTAACAACAATAACAACAACAACGTTGTTGTTGGTGGTAATAAAGGCCTGTTTGTGAAGATCAATATGGATGGAGTTCCCATAGGCAGAAAAGTGGACCTTAATGCTTACTGTAGCTATGAAAAACTCTCCTCTGCTGTTGACGAGCTCTTTAGAGACCTCCTTGCTGCTCAAAAAGATTCCTGTGGTGGTGGGATTCAGAACAAGCAAGAGGAAGAGAAAGCCTTCATAGGCTTATTGGACGGAAGTGGGGAGTACACTCTGGTTTATGAGGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTGTCAACAGTGAAGAGGCTGCGTGTACTGAAGCGTTCTGAGCTCCCTGCTTTTACTCGTGGCAGTAAGCAAGACAAAATTGCCACTTAA 942 0.4618 MNGRSRNEEVSPQLLDLIPKDREWHENRAHKFSEERKLELRLGPPGEEEDDVIRGRNESLLSLGYFSASVNGGHTQKPVSSPWASSSKTQNINQHKGVSVSSSFLQPQPSPPANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSKVVSQHESQNHQQHVVVEDKVAGKKPVANNNNNNNVVVGGNKGLFVKINMDGVPIGRKVDLNAYCSYEKLSSAVDELFRDLLAAQKDSCGGGIQNKQEEEKAFIGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKRSELPAFTRGSKQDKIAT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1496 313 MobiDBLite consensus disorder prediction 73 126 - -
Acco09g1496 313 ProSiteProfiles PB1 domain profile. 192 301 IPR000270 GO:0005515
Acco09g1496 313 MobiDBLite consensus disorder prediction 140 160 - -
Acco09g1496 313 FunFam Auxin-responsive protein 188 307 - -
Acco09g1496 313 Pfam AUX/IAA family 38 299 IPR033389 -
Acco09g1496 313 SUPERFAMILY CAD & PB1 domains 190 293 - -
Acco09g1496 313 Gene3D - 187 307 - -
Acco09g1496 313 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 37 299 IPR003311 GO:0005634|GO:0006355
Acco09g1496 313 MobiDBLite consensus disorder prediction 73 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1496 Acco-ChrAcco09 30731945 30734807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1496 195 307 B3 DNA Binding Superfamily AT4G23980 32.743 3.03e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco09g1496 AUX_IAA 3.9e-69 CL0072