Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1495 ATGACTTTTTTCTTGAGGCCTCACTTGTATTTGCTTCACTTTCTTCTCTTCCTTCTTAACCTCCACTCCATTTCTTCGTATACCTTTCCCTTAAATTGCAAGGACACAGCTCGTGTATGCACTTCTTTCTTGGCCTTTAAACCTCAACCAAATCAAACCTTAGCCATAGTTCAGAGCATGTTTGATGTATTGCCTAAAGACATTACTGTTGAAGGCAACGGTCGGGACTACCTATTTATCAGAAAGAACTGTTCTTGTGCAGCTGGTACAAACAAATACATATCAAGCACCACTTATACTGTAAAATCCAATGAAGGGTTGGTCTATGATTTAGTTATGAAAACCTATGATGGGCTTGGTTTCTTGCCCAAAACGACCAGGAGGGCTGAAAACGGCGCCGTTATAACATTGAAATTGTTTTGTGGTTGCTCTAGTGGACCCTGGAACTATATGATGAGTTATGTGATGAGAGAAAGTGATAGCATTGAATCTCTAGCGAGTCGGTTTGGGGTTAGTATGGATAATATAGAGACAGTAAATGGCATCAACAATCCTGATAATACCACTGTGGGCTCCTTGTATTATATACCTCTTAATTCGGTTCCTGGTGAGCCATATACCCAGAAAAATGATGCTTCTGCAGCTCCAGTACCTGAACCTGCCCCTTCTATTGACAATGTTTCTGCTAGTCAAGTCAGTCATGCTCATGCACCCTACGTATGGATCGTTGGGGGTTTAGGGATTGGTCTTGTCCTGATAATGTTATGCATAATTCTTTATTTCTGTGTGAGATCGTTCCATTGCTTTGCTGAAGCAAGGACAAGTCATGAAAAAGATGATGAAGGCAAGATCTCTCACAAATTTCATGTCCTTCAAAATCCAAGTTTTTGCTGTGGTTCAGGAAGGTACATACAGGGCAAACCTGTAGAACAGGGGCAATATGATCGTGAATCCAGAAACAACCAGATTACTGCCCCCAAAGTTTCAACTTTGGGAATTGGTGTCTTTGAAGTGGAGAGCCCTGTTGTTTTCACACATGAAGAGATTCTTTCTGCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCACGGTACTTATGGTTCTGTTTATCATGGCTTCATTCGTGACCAGGATGTTGCTATTAAAAGAATGACTGCTACAAAAACTAAAGAATTCTTGTCAGCGATGAAGGTCCTGGGCAAGGCTCATCATGCAAATCTCGTAGAATTGATCGGCTATACTGCTAGTCACGATGAGCTCTTCCTTATCTATGAATATGCCCAGAAGGGTTCACTTGGAAGCCATTTGCATGATCCACTGACAAAGGGTTCTTCCTCACTCTCTTGGATCATGAGGGTTCAGATAGCACTTGATGCTGCTAGGGGCGTTGAGTATATACATGAGCACACCAAAACCAATTATGTCCATAGAGATATCAAGTCAAGCAACATCTTACTTGATGCTTCCTTTAGAGGAAAAATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAGCAAATGAGGAAGAAATTACTGCCTCCAAAGTTGTTGGCACGTATGGTTATCTTGCGCCAGAATACTTGAGTAATGGCTGTGCTACTACCAAAAGCGATGTCTATGCATTTGGCATTGTTCTTTTTGAGATAATATCAGGGAAGGAGGCCACTATTCCGACAGAAGACGCAATGTCAAAAAATCCTCAGAGACGTTCTCTTGTATCTATTATGTTGGCTGCTCTTAGGAACTCACCTGATTCAATGAGTATGTCTAGTTTGAGAAATCATATTGATCCTAATATGATGGACCTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGAAGATCCCATATTAAGACCTGATATGAAACAAGTTGTGATTTCACTCTCACAGATCCTTCTGTCTTCTATTGAGTGGGAAGCAACTCTGGCAGGGAACAGCCAAGTATTCAGTGGGCTTGTTCAGGGAAGATAG 2001 0.4138 MTFFLRPHLYLLHFLLFLLNLHSISSYTFPLNCKDTARVCTSFLAFKPQPNQTLAIVQSMFDVLPKDITVEGNGRDYLFIRKNCSCAAGTNKYISSTTYTVKSNEGLVYDLVMKTYDGLGFLPKTTRRAENGAVITLKLFCGCSSGPWNYMMSYVMRESDSIESLASRFGVSMDNIETVNGINNPDNTTVGSLYYIPLNSVPGEPYTQKNDASAAPVPEPAPSIDNVSASQVSHAHAPYVWIVGGLGIGLVLIMLCIILYFCVRSFHCFAEARTSHEKDDEGKISHKFHVLQNPSFCCGSGRYIQGKPVEQGQYDRESRNNQITAPKVSTLGIGVFEVESPVVFTHEEILSATDGFSDSNLLGHGTYGSVYHGFIRDQDVAIKRMTATKTKEFLSAMKVLGKAHHANLVELIGYTASHDELFLIYEYAQKGSLGSHLHDPLTKGSSSLSWIMRVQIALDAARGVEYIHEHTKTNYVHRDIKSSNILLDASFRGKISDFGLAKLVGKANEEEITASKVVGTYGYLAPEYLSNGCATTKSDVYAFGIVLFEIISGKEATIPTEDAMSKNPQRRSLVSIMLAALRNSPDSMSMSSLRNHIDPNMMDLYPHDCVFKMAMLAKQCVDEDPILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1495 666 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 46 660 IPR044812 GO:0019199|GO:0045087
Acco09g1495 666 FunFam PTI1-like tyrosine-protein kinase 3 428 652 - -
Acco09g1495 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Acco09g1495 666 SUPERFAMILY LysM domain 152 197 IPR036779 -
Acco09g1495 666 Gene3D LysM domain 148 206 IPR036779 -
Acco09g1495 666 SMART serkin_6 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1495 666 ProSiteProfiles Protein kinase domain profile. 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1495 666 Gene3D Phosphorylase Kinase; domain 1 334 427 - -
Acco09g1495 666 Pfam Protein tyrosine and serine/threonine kinase 360 636 IPR001245 GO:0004672|GO:0006468
Acco09g1495 666 ProSitePatterns Protein kinases ATP-binding region signature. 362 383 IPR017441 GO:0005524
Acco09g1495 666 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Acco09g1495 666 SUPERFAMILY Protein kinase-like (PK-like) 336 638 IPR011009 -
Acco09g1495 666 Gene3D Transferase(Phosphotransferase) domain 1 429 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1495 Acco-ChrAcco09 30696538 30701819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1495 30 666 Receptor kinase-like Gene Family AT1G51940 63.411 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco09g1495 PK_Tyr_Ser-Thr 7.7e-48 CL0016