Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1491 ATGGCGCGGCGGTGTTCACACTGCAGCAATAACGGGCATAACTCCCGAACTTGCCCGACCCGGAGTGGAGGTGCCGGTGGTGGAAGCGCGGGAGGTGTGAAGCTATTCGGTGTTAGACTCACCGATGGATCGATCATTAAAAAGAGCGCGAGTATGGGGAATCTCTCGGCCCATTACTATTCTTCTTCGTCCGCCGCTGGATCACCGAATCCCGAGTCGCCGTGCTCTGACCCTCTCCGAGACTTGGGTCATGAGCAAGACGGGTATTTGTCCGATGACCCCTCTCATGCCTCCAGTTCCGCGAACCATCGTGGAGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATAAGATGTTTTTAATTGGTCTCCAGAAGCTGGGTAAAGGAGATTGGCGAGGCATATCTCGCAATTTTGTTGTGTCAAGAACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGTAATGTTACCCGGAGAAAGAGGCGTGTCAGTCTTTTTGACATGGTTCCAGATGTGGCTTCAGATCCGCCTTCGGTGCCGGAAGAACAAGTATTACTGCCACCTTCCAATAACTCTCAACATGGTAGTGCAAATTTACAACCATCATTAGATCTCTCCCTCAAGTCAGATTATGAACCCATGGAAACTAATTGTGAAGAAAATGTGGAAGAGCCCCGTGAAACTATGATTAGATCAAGTGGATTGACACCGGTGGCTAACGGATTCATGCCAACATATGTGCCTGTTGCATTTTCCTTATGGCCATCAAATGCAGCTCCATTTGAAGAAGTTAAGGAGGCTGAGACAGTTCATCATCAGGTCCTTAAGCCAATCCCTGTCGTTCCAAAGGAGCCAGTCAATGTTGATGAACTTGTTGGCATGTCTCAGCTGAGTTTGGGGGAAACACAGAAAGGCGATAGAGAGCCTTCCCCACTTTCTTTGAAGTTGGTGGGCGAGCCCCCAAGGCAATCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCAGATTTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1068 0.4841 MARRCSHCSNNGHNSRTCPTRSGGAGGGSAGGVKLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNPESPCSDPLRDLGHEQDGYLSDDPSHASSSANHRGERKKGVPWTEEEHKMFLIGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNVTRRKRRVSLFDMVPDVASDPPSVPEEQVLLPPSNNSQHGSANLQPSLDLSLKSDYEPMETNCEENVEEPRETMIRSSGLTPVANGFMPTYVPVAFSLWPSNAAPFEEVKEAETVHHQVLKPIPVVPKEPVNVDELVGMSQLSLGETQKGDREPSPLSLKLVGEPPRQSAFHANAPVGGSDLNNGKNSAIQAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1491 355 SMART sant 109 159 IPR001005 -
Acco09g1491 355 MobiDBLite consensus disorder prediction 7 22 - -
Acco09g1491 355 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Acco09g1491 355 FunFam transcription factor MYB1R1 111 162 - -
Acco09g1491 355 Gene3D - 111 163 - -
Acco09g1491 355 MobiDBLite consensus disorder prediction 59 112 - -
Acco09g1491 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 284 - -
Acco09g1491 355 SUPERFAMILY Homeodomain-like 107 162 IPR009057 -
Acco09g1491 355 CDD SANT 112 157 IPR001005 -
Acco09g1491 355 MobiDBLite consensus disorder prediction 180 207 - -
Acco09g1491 355 MobiDBLite consensus disorder prediction 191 207 - -
Acco09g1491 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Acco09g1491 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Acco09g1491 355 MobiDBLite consensus disorder prediction 1 30 - -
Acco09g1491 355 MobiDBLite consensus disorder prediction 305 355 - -
Acco09g1491 355 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1491 Acco-ChrAcco09 30671269 30675376 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1491 Myb_DNA-binding 1.8e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1491 09 30671269 30675376 Acco09g1491 09 30671269 30675376 ECH