Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1471 ATGACACCTCTCCTCACTGAATCTCCTGTCTCCTCTGAAACTTGTTCATCATCTTCTTCCTCTGATTCCAAATCTCAATCACAACACACCACCACTAGACCTGCCAAAAGACCCCGACCTTCTCCCTCTACTTCTTCGCGCTCATCATCTTCTTCATCGTCTTCTTCTTCGACTTCTTCTGATTCTTCCGGCAAGCTCCCGAACTACCATGGCGTCAGAATGCGAAGCTGGGGCAAATGGGTGTCTGAGATTCGCGAGCCACGCAAGAAGTCTCGCATCTGGCTTGGAACTTTCGCCAATCCGGAAATGGCCGCTCGAGCCCACGACGTCGCTGCGCTCTCCATCAAAGGCAAATCCGCCATTCTCAACTTCCCTCAGTTTGCCGCCCTCCTTCCCAGACCCGCCACGTGCTCCCCACGTGACATCCAAATCGCTGCTTCCGCCGCCGCTGCCATGGTCAAGTACGACACCGTGAGAACCTCAGAAGCGTCCGGGTCACAGTCATCACCGTCGTCAGAGTCGACAGAGTCTTCAGAGCTGAGTGAGATAGTGGAATTGCCGACTATAGAAGAAGAGAGCTTCCACTCGGCCGAGTCAATGACCGAGTTCTTATGGATAGACTCGGCAGATAGTTGGGTGTTTCCGGGTACGGGTGTGGGTTCGGATTATTCTGAACTGATGATGAACTCCATTTTCTCCCAGCAATTCTCAGAGGAGATGCCACTCTGGGATTAA 735 0.5279 MTPLLTESPVSSETCSSSSSSDSKSQSQHTTTRPAKRPRPSPSTSSRSSSSSSSSSSTSSDSSGKLPNYHGVRMRSWGKWVSEIREPRKKSRIWLGTFANPEMAARAHDVAALSIKGKSAILNFPQFAALLPRPATCSPRDIQIAASAAAAMVKYDTVRTSEASGSQSSPSSESTESSELSEIVELPTIEEESFHSAESMTEFLWIDSADSWVFPGTGVGSDYSELMMNSIFSQQFSEEMPLWD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1471 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 46 195 - -
Acco09g1471 244 SUPERFAMILY DNA-binding domain 68 125 IPR016177 GO:0003677
Acco09g1471 244 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Acco09g1471 244 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Acco09g1471 244 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Acco09g1471 244 FunFam Ethylene-responsive transcription factor 2 68 126 - -
Acco09g1471 244 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Acco09g1471 244 MobiDBLite consensus disorder prediction 1 70 - -
Acco09g1471 244 MobiDBLite consensus disorder prediction 1 66 - -
Acco09g1471 244 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Acco09g1471 244 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Acco09g1471 244 MobiDBLite consensus disorder prediction 161 182 - -
Acco09g1471 244 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1471 Acco-ChrAcco09 30422664 30423398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1471 41 215 AP2-EREBP Transcription Factor Family AT5G11590 52.941 6.04e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco09g1471 AP2 3.2e-12 CL0081