Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1459 ATGATCATGGCTGGAAACCCTAACTGGTGGAGCATGCATCCACCTGCAACTTTGATCCCTCCTCCTCAGTATGAGCTTGGATCTTCTTCTTCATCAATTCCCATGAATTTCTTCACTGAATCCCAAGAAACTCCTCACTCTTGCAGCCAGATGCTTTTCGCAGGGTTGCCTGGAGAAGAAGAGAGAATGGGTTCGAATAATCATTTTGAAAGCAGCAAGAAGATGGAACATTGGGAAGAACAGATTCTGAATAATAATAATAATAATCCATCTTCCTCATCAAGAGTTGTTGTTGACGCAATAAAGCAAGAGGTTTCTTCTCAAAGTGGTGGTAACAACTTGTACGGCCATGGTGGAAGTGACGAGTTTCAGACTGCTTCTTCAGGATCTTACTGGTTAAACAACATGACGATGCCACCAGTAATAATTCCTCCTAATAACTCTCGTCCCATCTCTACTAGCTCAAGTAGTAACGCTTCTAATATTTTGGATTTCACTCATAACAACAAGCCCCATCATAGCAACAATAACCCATCTCAGAGTAATAAGAAAGCTAGGGTTCAGGCCTCTCCAAGCCAACCTCCTCTCAAGGTGAGAAAGGAGAAACTAGGCGATAGAATAACAGCACTTCACCAGTTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAGGTCATTGGATATATTAAATTCCTGCAAGGTCAAATTGAGGCACTAAGCTCACCTTACATGTCCAGTGCATCCAAAAACATAAGGAATCAACACTCTATACTTGGAGAAAGGAATTCTGTGTTCCCAGAGGACCCGGGTCAGCTGTTGAATGACACTGGCCTCAAAAGAAAAGGAGCTTCATCAAACCAGGAAGGAGGAGAAAAGCCGAAGGACTTGAGGAGTAGAGGACTTTGCTTGGTGCCTGTGTCTTGCACTGAACATGTTGGCAATGAAAATGGAGCTGATTACTGGGCACCTGCTTATGCCACCGGTTTCTAA 1002 0.4341 MIMAGNPNWWSMHPPATLIPPPQYELGSSSSSIPMNFFTESQETPHSCSQMLFAGLPGEEERMGSNNHFESSKKMEHWEEQILNNNNNNPSSSSRVVVDAIKQEVSSQSGGNNLYGHGGSDEFQTASSGSYWLNNMTMPPVIIPPNNSRPISTSSSSNASNILDFTHNNKPHHSNNNPSQSNKKARVQASPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEVIGYIKFLQGQIEALSSPYMSSASKNIRNQHSILGERNSVFPEDPGQLLNDTGLKRKGASSNQEGGEKPKDLRSRGLCLVPVSCTEHVGNENGADYWAPAYATGF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1459 333 CDD bHLH_AtbHLH_like 197 244 IPR045239 -
Acco09g1459 333 MobiDBLite consensus disorder prediction 143 197 - -
Acco09g1459 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 249 IPR036638 GO:0046983
Acco09g1459 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Acco09g1459 333 Gene3D - 197 261 IPR036638 GO:0046983
Acco09g1459 333 MobiDBLite consensus disorder prediction 279 300 - -
Acco09g1459 333 FunFam Transcription factor bHLH123 family 197 260 - -
Acco09g1459 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 66 315 - -
Acco09g1459 333 MobiDBLite consensus disorder prediction 147 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1459 Acco-ChrAcco09 30312638 30318376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1459 181 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 55.147 6.99e-36 133