Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1452 ATGTCCGACCATCCTCAACACTATCATCCTTCTCCTGCTCTCTCCCTCAGCCTTGCGGGAATCTTTCGCCGTGATGACGGGGCGAGCAACGCCGAGGTGGTAGAGACCGGGGAGGAGGCCAGTGGCGGAGGAGGGCGGCGAGACAACACCACCACCACTGTTCATGAGATTAGCAGCGAGAATTCTGGGCTCATGGGCCGATCGTCGAGATCCGACGATGGCTTATTCGACGAAGAAGCTGAGCCCGAAGGCGGTGACGATGTTGAAGGTGACGACGGAGACAACAACAATAAGAACAAGAAAAAGAGGAAGAGATATCATAGGCACACTGCTGAGCAGATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCTCCACATCCTGATGAAAAGCAGAGACAACAACTTAGCCAGCAATTAGGCCTCGCTCCTAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCTATACAAGAGCGTCATGAGAATTTATTGCTAAAGTCAGAAATTGATAAACTGAGAGAGGAAAATGAGGCACTGAGGGGGATCATAAACAAAGCTTGCTGCCCCAACTGTGGCGTCCCCACCATTTCGTCCTCAGATGCTTCCATGCCTCCTGACGAACACCAACTTCGTGTAGAAAATGCCAAACTCAAATCTGAGATTGAGAAGCTTCGAAGAGCAGTAGGGAAGGGCCCACTGGGGATGACTACAACATCACCTTCTTCGAGCTCTTTGGGAAATGAGCAAGTAGTGGAGAACAGAAGCTGTATGGAAATTTACAGTGGAATTTTTGGACTTGAGAAGACAAGGATAATGGAGCTAGTTAACAAAGCAATGGAAGAGCTCATAAAGATGGCCACTATTCAGGAACCATTATGGGTTCGTAGCGTTGAGACTGGTCGCCAAATACTTAATTACGATGAATATGTGAAAGAGTTCAACGTTGAACACTCCTCCTCCTCGTCAAAGAGATACTACATTGAAGCTTCAAGAGAAACTGGGGTTGTGTTTTTGGATCTCCCTCGTATTCTTCAAATCTTCTTGGACGTGAATCAATGGAAGGAGATGTTTCCGAGCTTAATATCGAAGGCTGCTATTGTTGATGTTATTTGTAGTGGTGAAGGTGCCAACAGGGACGGCACGGTGCAACTGATGTTTAGCGAGGTGCAAATGGTGACACCAATGGTGGGGAGCAGAGAAGTGTATTTTGTGAGGTACTGCAAGCAATTGAAGGAAGAAGAGTGGGCAATAGTGGATGTATCCATAGAAAATGTACAAGACACTGTTGAGGCTTCTCTCCTCAAATGCAGAAAACGCCCTTCTGGCTGCATCATTCAGGATACCAACAACGGCCACTGCAAGGTAACATGGGTGGAGCACGTAGAATGTGAGAAGAGCACGGTTCAGATAATGTACCGGAGCATAGTGAAGAGCGGGCTAGCGTTCGGGGCGAGGCGGTGGCTGGGGACGTTACAACAGCAATGTCAGAGACTGGTGTTCGTGATGGCGACGAATGTGCCGATGAAGGAGTCGGTGGGGGTTGGGACGGTGGCGGGGAGGAAGAGCGTGATGAGGTTGGCACAGAGAATGAGTAAGAATTTCTGTCACGCCGTGGGGGCTTCAAGCTTGCACACATGGAGCAAGTACAGTGGAGAGAATGGATTAGACATTAGGGTCAGCTCAAGAAAGAACTTGAGTGATCGTGGAGAGCCTCTTGGTCTTATATTATGTGCTGTTTCTTGTGCCTCGCTTCCCCTCTCTCCTCGCCTTCTCGTCGACTTCTTGAGGGACGAAGCTCGACGTTCTCAGTGGCAAGTGACGACTGGCTGTGAGCACGTGCGTTCCTTCGTAAACTTGGCCAAAGGAAAAGATCGAGGCAACGCCGTAACCATCATGGAAGTAAAATCTAAAGATGAGAGTAACTGTACGTGGATTCTGCAAGACAGTAGCACGAGTATGTACGAATCAACGGTGGTGTATGCTCCGGTAGACATCACCCGCATGCAGTCGGTGATCGCCGGCCGCGACTCCACCGACGTCCCGATTCTGCCGTCTGGATTCTCCGTCATCCCCGACGGACTGGATGCCATAAGACCGTTAATGATCACTTCTTCTTCATCAATGCATGGAGGAGGAGGAGAAGAAGAAGAAGAAAAGAACACAGAAGGAGGGTCTCTGCTTACAATAGCATTTCAGGTCCTCGTCAGTACTTGTCCTTCTGATAAGCTAACACCCGAGTCCCTTGAATCTGTCAGTAGTGTTATGTCTTGTACTTTGAGAAATATCAAAACAAGCTTACAGTGTGAGGATAGCTAG 2328 0.4871 MSDHPQHYHPSPALSLSLAGIFRRDDGASNAEVVETGEEASGGGGRRDNTTTTVHEISSENSGLMGRSSRSDDGLFDEEAEPEGGDDVEGDDGDNNNKNKKKRKRYHRHTAEQIREMEALFKESPHPDEKQRQQLSQQLGLAPRQVKFWFQNRRTQIKAIQERHENLLLKSEIDKLREENEALRGIINKACCPNCGVPTISSSDASMPPDEHQLRVENAKLKSEIEKLRRAVGKGPLGMTTTSPSSSSLGNEQVVENRSCMEIYSGIFGLEKTRIMELVNKAMEELIKMATIQEPLWVRSVETGRQILNYDEYVKEFNVEHSSSSSKRYYIEASRETGVVFLDLPRILQIFLDVNQWKEMFPSLISKAAIVDVICSGEGANRDGTVQLMFSEVQMVTPMVGSREVYFVRYCKQLKEEEWAIVDVSIENVQDTVEASLLKCRKRPSGCIIQDTNNGHCKVTWVEHVECEKSTVQIMYRSIVKSGLAFGARRWLGTLQQQCQRLVFVMATNVPMKESVGVGTVAGRKSVMRLAQRMSKNFCHAVGASSLHTWSKYSGENGLDIRVSSRKNLSDRGEPLGLILCAVSCASLPLSPRLLVDFLRDEARRSQWQVTTGCEHVRSFVNLAKGKDRGNAVTIMEVKSKDESNCTWILQDSSTSMYESTVVYAPVDITRMQSVIAGRDSTDVPILPSGFSVIPDGLDAIRPLMITSSSSMHGGGGEEEEEKNTEGGSLLTIAFQVLVSTCPSDKLTPESLESVSSVMSCTLRNIKTSLQCEDS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1452 775 ProSiteProfiles START domain profile. 268 504 IPR002913 GO:0008289
Acco09g1452 775 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Acco09g1452 775 FunFam Homeobox-leucine zipper protein GLABRA 2 277 500 - -
Acco09g1452 775 SMART HOX_1 101 164 IPR001356 GO:0003677
Acco09g1452 775 MobiDBLite consensus disorder prediction 29 109 - -
Acco09g1452 775 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Acco09g1452 775 Gene3D - 89 170 - -
Acco09g1452 775 SUPERFAMILY Bet v1-like 271 501 - -
Acco09g1452 775 MobiDBLite consensus disorder prediction 45 68 - -
Acco09g1452 775 CDD homeodomain 107 158 IPR001356 GO:0003677
Acco09g1452 775 Coils Coil 211 231 - -
Acco09g1452 775 SMART START_1 277 501 IPR002913 GO:0008289
Acco09g1452 775 Coils Coil 159 186 - -
Acco09g1452 775 MobiDBLite consensus disorder prediction 707 726 - -
Acco09g1452 775 Pfam Homeodomain 103 158 IPR001356 GO:0003677
Acco09g1452 775 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 101 771 IPR042160 -
Acco09g1452 775 SUPERFAMILY Homeodomain-like 92 161 IPR009057 -
Acco09g1452 775 SUPERFAMILY Bet v1-like 523 699 - -
Acco09g1452 775 Gene3D - 276 501 IPR023393 -
Acco09g1452 775 FunFam Homeobox-leucine zipper protein HDG1 89 176 - -
Acco09g1452 775 Pfam START domain 278 501 IPR002913 GO:0008289
Acco09g1452 775 CDD START_ArGLABRA2_like 272 500 - -
Acco09g1452 775 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1452 Acco-ChrAcco09 30214030 30219618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1452 57 774 Homeobox Transcription Factor Family AT1G79840 57.459 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco09g1452 START 4.4e-55 CL0209