Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1395 ATGGATGTTACCTCTCCAGAACTAAATAGAAACTCCCAAAGTGACAGATATCCTTTGCTGATGGAGCGGTCTGAAAGCCATCATCAGCATGTAATTGACATCACAAGGAATGGTGATGTTTTATCCAACTCATCTAATGTTGCTCAACTTCCTGAAATACATTTAATGCAGAATGAAGATCAGCAGTCCAGTGGTACACGAGAGTCTACTCATCAAACATCTTCCTCATCCAGATTAAACTCTAGAAATTCTTCATCTAGAGGTGAGGGATATCGTCATCGAAGAAGGAATCCATTAAATTCTGGACTATGGATTTCAGTTGAGCTTGTTGTCACTGTGGGTCAGATCATAGCATCTATAGTTGTTTTGTCATTGTCAAGGAACGAAAGTCCACAAGCCCCATTATTTGCATGGGTTGTGGGTTATACATCTGGTTGTGTTGCTACACTTCCTGTTCTATATTGGCGTTATCAAAGCCATAATCAAAGTACTGAACAAGTTACATCTCAACAATCTCAAGGATCTTCTAGAATTGATCATCCATTACCTACCTCATACACTGCTATATCCGATGCTCATGTTTCAGAAGAAGAGAATAGTCATGTGACAGAATCTGCTGCTAGAAACACCAGGATTCCTGGACCTTTTTTTTCTAGGCTTAATGGATTAGTAGATCATTTCAAAATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTGGGTAATGTGTGGATCTTTGGAGGTCACTCTTCTCCTTCCAATGCTCCAAAATTGTATAGGTTATGTATCGTGTTTCTTACCTTTAGCTGCATTGGATATGCTATGCCATTTATCCTATGTGCAACAATCTGTTGCTGCCTACCTTGCATAGTTTCTGTTCTAGGAATCCGGGAAGATTTTTCTCAAACTAGAGGCGCAACAGTAGAGTCTATCAATGCCCTGCCAATCTACAAGTTCAAATTGAAGAAAACTGAAAATAGTGACAATCGGGATGTCAACACAGTTACAGATGAAGGTGGCATCTTTGCTGCCGGGACAGAAAAAGAGCGGACCATATCTGGAGAAGATGCTATTTGTTGCATTTGCTTGGCGAAATATGCTGACAATGATGATCTTAGGGAGTTATCTTGTCTTCATTTCTTCCACGTAGAGTGTGTTGACAAATGGTTGAAGATAAATGCGTCATGTCCTCTTTGTAAAAGTGATGCCGGCAAGATTAGTGGAGGATCTCCGTCAGCTGGGGACTCCAGTTAG 1257 0.4057 MDVTSPELNRNSQSDRYPLLMERSESHHQHVIDITRNGDVLSNSSNVAQLPEIHLMQNEDQQSSGTRESTHQTSSSSRLNSRNSSSRGEGYRHRRRNPLNSGLWISVELVVTVGQIIASIVVLSLSRNESPQAPLFAWVVGYTSGCVATLPVLYWRYQSHNQSTEQVTSQQSQGSSRIDHPLPTSYTAISDAHVSEEENSHVTESAARNTRIPGPFFSRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSNAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIVSVLGIREDFSQTRGATVESINALPIYKFKLKKTENSDNRDVNTVTDEGGIFAAGTEKERTISGEDAICCICLAKYADNDDLRELSCLHFFHVECVDKWLKINASCPLCKSDAGKISGGSPSAGDSS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1395 418 SMART ring_2 360 400 IPR001841 -
Acco09g1395 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 343 407 IPR013083 -
Acco09g1395 418 MobiDBLite consensus disorder prediction 58 86 - -
Acco09g1395 418 Pfam Ring finger domain 360 401 IPR001841 -
Acco09g1395 418 SUPERFAMILY RING/U-box 353 406 - -
Acco09g1395 418 ProSiteProfiles Zinc finger RING-type profile. 360 401 IPR001841 -
Acco09g1395 418 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 403 - -
Acco09g1395 418 MobiDBLite consensus disorder prediction 58 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1395 Acco-ChrAcco09 29391012 29396571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1395 1 411 C3H Transcription Factor Family AT1G80400 56.325 4.77e-162 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1395 09 29391012 29396571 Acco09g1395 09 29391012 29396571 ECH