Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1327 ATGGCGCAAATTTTGCTTCATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTTAAGACTGGTGGTGGCAATATCTTCAGCAAGCTCAAGGGAAATCTTGAGGAGGTAATTGGTTTTGGAAAGGGAGTTACAAAACTCTATGCAACCATCGATCTTGAGAAGGCCAGAGTTGGAAGAACTAGAATTCTGGAAAATGAACATTCCAACCCGAGGTGGTATGAGTCTTTTCACATTTATTGTGCTCACATGGCTTCTGATATTATATTCACCGTGAAAGATGCTAATCCTGTTGGGGCAACCTTAATTGGAAGAGCACATGTGCCTGTTACAGATGTGTTGGATGGTGAGGAAATAGATAGGTGGGTTGAACTCTTGGATGAGCACAAGAATCCCATTCGTGGTGATTCAAAAATCCATGTGAAACTGCAATATTTTGATGTCACCAAAGATCACAGCTGGGCTCGCGGTATTAGAAGTGCTAAGTATCCTGGAGTTCCATACACTTTCTTCTCACAGAGACAAGGGTGTAAGGTCTCTCTGTACCAAGATGCTCATATCCCAGATGGATTTGTCCCTGAAATACCTCTTGCTGGAGGTGAGAAATATGCTCCTCATAGATGTTGGGAGGATATATTTGATGCAATCACTAATGCCAAGCACCTAATATACATTACTGGTTGGTCTGTATATACTGACATCTCCTTGGTAAGGGATAAAAGGAGGCCAAAGCCAGGTGGAGATACAATGCTTGGTGAGCTCCTCAAGAAAAAGGCAAGTGAAGGTGTCAAGGTTTTAATGCTTGTGTGGGACGATAGAACATCTGTCGGTTTGTTAAAAAAAGATGGATTGATGGCTACTCATGATGAAGAAACTGAGCACTACTTCCAGGGCACTAATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGGGGAAGCATTATCCAGGACTTGCAAATTTCTACCATGTTCACCCATCATCAGAAGATTGTGGTGGTGGACAGTGCATTGCCAAGTGAAGGATCAGACAAGCGAAGAATTGTTAGTTTTGTTGGGGGTATTGATCTCTGTGACGGTAGATATGATACTCCCTTCCACTCACTGTTCAGAACTCTCGACTCAGCACACCATGATGACTTTCATCAACCCAACTTCCCTGGTGCTGCGATCACAAAAGGTGGTCCTAGGGAGCCTTGGCATGACATCCATTCCCGGCTTGAAGGACCCATTGCTTGGGATGTTTTATTTAACTTTGAACAAAGATGGAGGAAGCAAGGTGGGAAGGATGTGCTTATTCAGTTGAGAGAGCTTCAAGATGTCATCATTCCTCCATCCCCAGTTATGTATCCTGATGATCATGAGGCATGGAATGTTCAGTTATTTAGATCTATTGATGGTGGAGCTGCTTTTGGGTTTCCAGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTCATTAGTGGGAAGGATAATATCATTGATCGTAGTATTCAGGATGCTTATATCCATGCCATTCGGCGAGCAAAGGATTTCATTTATATTGAAAATCAGTACTTCCTTGGAAGCTCTTTTGCTTGGAGCGCTGATGGTATCAAACCTGAGGACATAAATGCTTTGCATGTCATCCCAAAGGAGCTTTCACTTAAAATTGTTAGCAAGATCGAAGCTGGGGAAAGATTCACTGTATATGTTGTGGTCCCAATGTGGCCAGAGGGTGTCCCTGAAAGTGCATCAGTGCAGGCAATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTACAAGGATGTTATTCAGGCACTCAGGGCCAATGGAATCGATGAAGATCCTCGCAACTATTTGACATTCTTCTGCCTCGGTAATCGGGAGTTGAAGAAACCTGGAGAGTACGAGCCTTCAGAAAGACCTGATCATGATTCTGATTATTTGAGAGCTCAAGAGGCTCGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGACGAGTACATTATCATAGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGGGACTCAGAGATTGCCATGGGTGCTTACCAATGCTATCATTTGGCTCACAGGCAACAGCCGGCACGGGGTCAGATCTATGGTTTCCGCATGTCATTGTGGTACGAGCACCTTGGCATGCTCGACAATTCCTTCCTCACACCTCAAAGCGAAGAATGTGTCAGGAAGGTGAACCAAATGGCTGACAAGTACTGGGACCTCTATTCAAGTGAGTCGCTGGAACACGACCTTCCTGGACACCTGCTTCGCTATCCCATTGGTATTTCTGAAGAAGGAGAAATCACAGAGCTGCCTGGATTTGAATTCTTCCCAGACACCAAGGCTCGTGTTCTCGGAGGCAAAGCTGACTACATGCCACCAATCCTTACAACTTAG 2427 0.4487 MAQILLHGTLHVTIFEVDRLKTGGGNIFSKLKGNLEEVIGFGKGVTKLYATIDLEKARVGRTRILENEHSNPRWYESFHIYCAHMASDIIFTVKDANPVGATLIGRAHVPVTDVLDGEEIDRWVELLDEHKNPIRGDSKIHVKLQYFDVTKDHSWARGIRSAKYPGVPYTFFSQRQGCKVSLYQDAHIPDGFVPEIPLAGGEKYAPHRCWEDIFDAITNAKHLIYITGWSVYTDISLVRDKRRPKPGGDTMLGELLKKKASEGVKVLMLVWDDRTSVGLLKKDGLMATHDEETEHYFQGTNVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSALPSEGSDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLIQLRELQDVIIPPSPVMYPDDHEAWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSFAWSADGIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDVIQALRANGIDEDPRNYLTFFCLGNRELKKPGEYEPSERPDHDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQCYHLAHRQQPARGQIYGFRMSLWYEHLGMLDNSFLTPQSEECVRKVNQMADKYWDLYSSESLEHDLPGHLLRYPIGISEEGEITELPGFEFFPDTKARVLGGKADYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1327 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco09g1327 808 Pfam C2 domain 8 126 IPR000008 -
Acco09g1327 808 Gene3D Endonuclease Chain A 199 442 - -
Acco09g1327 808 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Acco09g1327 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Acco09g1327 808 Gene3D C2 domain 6 158 IPR035892 -
Acco09g1327 808 SMART C2_3c 9 123 IPR000008 -
Acco09g1327 808 FunFam Phospholipase D delta 200 443 - -
Acco09g1327 808 Gene3D Endonuclease Chain A 478 695 - -
Acco09g1327 808 CDD PLDc_pPLDalpha_2 491 700 - -
Acco09g1327 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Acco09g1327 808 CDD C2_plant_PLD 2 147 - -
Acco09g1327 808 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Acco09g1327 808 Pfam PLD-like domain 504 688 IPR025202 -
Acco09g1327 808 SUPERFAMILY Phospholipase D/nuclease 150 444 - -
Acco09g1327 808 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Acco09g1327 808 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Acco09g1327 808 FunFam Phospholipase D 466 699 - -
Acco09g1327 808 SUPERFAMILY Phospholipase D/nuclease 441 738 - -
Acco09g1327 808 SMART pld_4 325 363 IPR001736 GO:0003824
Acco09g1327 808 SMART pld_4 653 680 IPR001736 GO:0003824
Acco09g1327 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1327 Acco-ChrAcco09 28572246 28575559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1327 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 81.011 0.0 1403
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1327 09 28572246 28575559 Acco07g0748 07 9243414 9246566 CCT
Acco07g0748 07 9243414 9246566 Acco09g1327 09 28572246 28575559 ECH
Acco10g1998 10 32601324 32604700 Acco09g1327 09 28572246 28575559 ECH
Acco09g1327 09 28572246 28575559 Acco09g1327 09 28572246 28575559 ECH