Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1304 ATGGCCGTTGTTTCTTTCTCTTTTCAACCTTATCTGCATCCATCCTCCGCTCCTTCGTCCTCGCCGTCCTCCTCCTCTTTTTTATGCGACAGTGTCCATCTTAGGACCCATAAGAACTGTATTTCTATCCATTCTCCTTCCCATTTTCCTTCTTTGACATCAACAAATAAGTCCTCCTCGAGGAGCTTCCGAACGGCGATTGCTGCCTTTGGCGACTATTATGCGACTCTTGGAGTCTCCACATACGCGACTAACAAGGAAATTAAGGGGGCTTATCGAAATTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATCAGTGCTGCAAATGAGGTGCTATCAGATGATAAGAAGAGGGCCTTGTATGATCAATATGGAGAGGCTGGCGTTAAGAGTGCTGTAGGAGGATCAAATGCTTATACGACTAATCCATTTGATTTGTTTGAGACATTTTACGGGCCAAGTATGGATGGCTTTGATGACATGGATCCAACTGGATTTGGAACACGCCGCCGCAGTACTGCTATCAAGGGTGAAGACATTCGGGGAAGGAAGATAAGAGACGAGAAACGAAGGCTGAGGAGGAAGAGGGACCGACTTAACGCTACTGCGAGGAGATGCACAATCCCATCTCGTGCGGCTTGGGCTATTTGA 684 0.4678 MAVVSFSFQPYLHPSSAPSSSPSSSSFLCDSVHLRTHKNCISIHSPSHFPSLTSTNKSSSRSFRTAIAAFGDYYATLGVSTYATNKEIKGAYRNLARQYHPDVNKEPGAIDKFKEISAANEVLSDDKKRALYDQYGEAGVKSAVGGSNAYTTNPFDLFETFYGPSMDGFDDMDPTGFGTRRRSTAIKGEDIRGRKIRDEKRRLRRKRDRLNATARRCTIPSRAAWAI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1304 227 Gene3D DnaJ domain 71 173 IPR036869 -
Acco09g1304 227 SUPERFAMILY Chaperone J-domain 69 172 IPR036869 -
Acco09g1304 227 Coils Coil 193 216 - -
Acco09g1304 227 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Acco09g1304 227 SMART dnaj_3 71 128 IPR001623 -
Acco09g1304 227 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Acco09g1304 227 Pfam DnaJ domain 72 133 IPR001623 -
Acco09g1304 227 PRINTS DnaJ domain signature 92 107 IPR001623 -
Acco09g1304 227 PRINTS DnaJ domain signature 128 147 IPR001623 -
Acco09g1304 227 PRINTS DnaJ domain signature 108 128 IPR001623 -
Acco09g1304 227 PRINTS DnaJ domain signature 74 92 IPR001623 -
Acco09g1304 227 CDD DnaJ 72 125 IPR001623 -
Acco09g1304 227 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 28 192 - -
Acco09g1304 227 FunFam Chaperone protein dnaJ A6 chloroplastic 69 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1304 Acco-ChrAcco09 28373126 28376279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1304 73 135 C2H2 Transcription Factor Family AT1G74250 43.478 1.27e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1304 09 28373126 28376279 Acco09g1304 09 28373126 28376279 ECH