Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1299 ATGGAAGATGCCCCCACTTGCCATGAACAAGTGCCTGATGGTGAATGCAATGAGGATCAGAAAGAAAGCGGTGCGATAACTGAATTAGGTGGTCAAAATTGTTTTTCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCATATGATGACGCTTACAATTACTATATCTGCTATGCCAAGGAGGTGGGATTTTGTGTAAGGGTAAAAAATTCATGGTTCAAGCGAAATAGCAGGGAAAAGTATGGTGCAGTTCTATGCTGTAGTAGTCAGGGTTTTAAAAGAGTAAAAGATGCTAACCATTTAAGAAAGGAAACAAGAACTGGCTGCCCTGCCATGATAAGGATGAGGTTAGTGGACTCGCAGAGATGGAGGATACTTGAGGTTTCACTTGAACATAACCATCTTTTAGGTGCCAAGTTAAACAGATCAATTAAAAAGATGGGAACTGGAGCCAAACGGAAGCCACTACCTGGTTCTGATAATGAAGTGCGAACAGTCAAGTTATACCGGGCACTTGTGATAGATACAGGAGGCGATGTGAATGCAAACTCAAATACTAGAGAATTTGGGACTTCTTTGGAATCTTCCAGTAAGTTGAACCTTAAAAAAGGTGACACTCAGGCCATTTATAACTACTTTTGTCGCATGCAGCTGACCAATCCAAATTTCTTTTACTTGATGGATTTCAATGAGGAAGGGCTGTTGAGAAATGTTTTTTGGGCTGATGCTAGGTCTAGGGCTGCCTGTGGCTATTTTGGTGATGTTATTTATTTTGACAACTCATATTTGTCAAACAAATTTGAAATCCCTCTTGTGGCATTTGTCGGAATTAATCACCATGGTCAATCAGTGTTATTGGGTTGTGGTCTACTCGCTGGTGAAGCATTAGAATCATACATATGGTTATTCAGAACATGGGTAACATGCATGTCAGGATCTCTTCCCCAAACTATTATCACTGATGGGTGCAAGGCTTTGCGGAGTGCCATTGCAGAAGTTTTTCCTGGAACCCGTCATTGTTTTGGATTGTCACTAATCATGAAAAGAGTACCAGAGAAGTTGGGAGGGTTGCGTAATTATGATGCAATCAGGAAAGCACTGAATAAAGCTGTTTATGAGACAATGAAAGTAATTGAGTTTGAGGCAGCATGGGGATTTATGATTCAGCGATTTGGAGTTAGTGATCATGAGTGGCTTCGTTCTATATATGAAGATCGGGTTCATTGGGCTCCGGTATTCATGAAGGACACATTTTTTGCTGGAATGTCCGCAGCAAGTCCTGGTGAGACCTTGAGTCCTTTTTTCGAGAAATATGTGCACAAACAGACACCTTTGAAGGAGTTTCTTGACAAGTATGAATTGGCTCTTCATAAGAAGCACAAGGAAGAATCCGCTGCTGACACTGACTCAAGAAGCTCTACTCCCTTGCTGAAAACAAGATGTTCTTTTGAATTGCAGCTATCTAGAATATACACACGAGAAATATTCATGAAGTTCCAATATGAAGTTGAAGAAATGTATTCTTGTTTTAGTACCACACAGTTACATGTGGATGGTCCCTTTATAATTTTCTTAGTCAAGGATCGTGTTTTAAGCCAAGGAAACAGAAGGGAGATAAAGGATTTTGAAGTCTTGTACAACAGGACAGCCGGCGAAGTTCGCTGCATCTGCAGTTGCTTTAACTTCAATGGGTATTTATGTAGGCATGCACTGTGTGCGCTCAATTTTAATGGGGTGGAGGAGATACCTTCCAGATATATTCTTTCCAGATGGAAAAAAGATTACAAGCACGTACATGTTCCTGATCACAACTCTAGTATTGACGATGAGACCGACCGTGTTCAATGGTTTAATCAGTTATTTAGAAGCTCCTTGCAAGTTGTGGAGGAAGGGACAATTTCCCTAGACCAATATAATGTAGCTTTGCATGCTTTTCAAGAATCATTGAGTAGGGTACATGATGTAGAACAGAGACAGGAGTAA 2001 0.4068 MEDAPTCHEQVPDGECNEDQKESGAITELGGQNCFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFCVRVKNSWFKRNSREKYGAVLCCSSQGFKRVKDANHLRKETRTGCPAMIRMRLVDSQRWRILEVSLEHNHLLGAKLNRSIKKMGTGAKRKPLPGSDNEVRTVKLYRALVIDTGGDVNANSNTREFGTSLESSSKLNLKKGDTQAIYNYFCRMQLTNPNFFYLMDFNEEGLLRNVFWADARSRAACGYFGDVIYFDNSYLSNKFEIPLVAFVGINHHGQSVLLGCGLLAGEALESYIWLFRTWVTCMSGSLPQTIITDGCKALRSAIAEVFPGTRHCFGLSLIMKRVPEKLGGLRNYDAIRKALNKAVYETMKVIEFEAAWGFMIQRFGVSDHEWLRSIYEDRVHWAPVFMKDTFFAGMSAASPGETLSPFFEKYVHKQTPLKEFLDKYELALHKKHKEESAADTDSRSSTPLLKTRCSFELQLSRIYTREIFMKFQYEVEEMYSCFSTTQLHVDGPFIIFLVKDRVLSQGNRREIKDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCALNFNGVEEIPSRYILSRWKKDYKHVHVPDHNSSIDDETDRVQWFNQLFRSSLQVVEEGTISLDQYNVALHAFQESLSRVHDVEQRQE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1299 666 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
Acco09g1299 666 Pfam MULE transposase domain 261 354 IPR018289 -
Acco09g1299 666 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Acco09g1299 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 660 IPR031052 GO:0006355
Acco09g1299 666 SMART 26again6 559 586 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1299 Acco-ChrAcco09 28330479 28332479 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco09g1299 MULE 7.6e-26 CL0219