Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1261 ATGGAGCACAACCCCTCTTCTCTCCACAATCATCCGGAAACGTATAATCAATATGTCTTCAATCAGATGCATTCACCCCCTTTCGATGACGAAGACTTTTTCAGCAACACATTTCATCAGACAGTTGGCAGTCTCTGTTCTAAAGGAGAATCATCAGATCTTATCTCCTCCTCCACCGTCACCACCGTCGCCGCTACCGACAATAATGGTTTCCCCAGCAGCAGCCTATTCTTCAACAACAACCCGAAGCAACCCGCAGTTTCAGCCTTCACTCTGTCCTTTGATAACTCCACCATTATCCCCATCACCAACTCGTCGCCCCCTGGACGAACCCGATCCACTCGTAACACTCAACCCAGAAACAAGTCCAGATCCTCTTCTGATGTTCTTCGTCACATTATGGCCGAGAGGAAGAGAAGACGAGATCTCACTCAAAAGTTCATCGCACTCGCCGCCGCCATCCCCGGCTTGAAGAAGATGGACAAAGCGACTGTACTTTGTGAGGCGATCGATTACGTGAAGCGACTTCAAGAGAGAGTGAGAGAATTAGAGAGTGTTGAAGGGAAGAGGAAGACAAATGGAGGAGGAGGAACGGCGGTGAGGAGAGGGAAGAATTCGATGGAGTTGTGTTGGTGTCGTCGGAGAGCACAGGAAGCTGTTGTTATTGAACTTCCGGAAATGGAAGCGAAGGTGTCGGATAATCAAGTTCTGCTTCGGATTCACTGTGAGAGACGAAGCGATATGATGCTGAAAATGGCCCAGATTCTTGAATATGTTCATCTCTCTGTCTTGAGCTGTAGCTCTCTGACTTTTGGAAACTCTGCTTTTAGCATCACCATTGTTGCTCAGATGAAGGAGAAATACAACATGAAGGTGAATGATTTAATAAAGTATTTGAGGCAACATCTGTTCAAATCCCATGATGTTCGATGCGACTCCACTTGGACAGCTATGCAAGGCAAATCCAAATTGATCAACAAACTTGTTAGCTTAACAATTCCAAAGCCAGGATCATATTCGATGGCTTCAAATCGAACACAAACTCAAGCTCGATGCAAGCCTTCAGCTCTTGTAGATCATCCTCGGAGAAGCTTTCAGAGGGACAATGGTGTCCACCTGTGA 1122 0.4652 MEHNPSSLHNHPETYNQYVFNQMHSPPFDDEDFFSNTFHQTVGSLCSKGESSDLISSSTVTTVAATDNNGFPSSSLFFNNNPKQPAVSAFTLSFDNSTIIPITNSSPPGRTRSTRNTQPRNKSRSSSDVLRHIMAERKRRRDLTQKFIALAAAIPGLKKMDKATVLCEAIDYVKRLQERVRELESVEGKRKTNGGGGTAVRRGKNSMELCWCRRRAQEAVVIELPEMEAKVSDNQVLLRIHCERRSDMMLKMAQILEYVHLSVLSCSSLTFGNSAFSITIVAQMKEKYNMKVNDLIKYLRQHLFKSHDVRCDSTWTAMQGKSKLINKLVSLTIPKPGSYSMASNRTQTQARCKPSALVDHPRRSFQRDNGVHL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1261 373 SMART finulus 133 182 IPR011598 GO:0046983
Acco09g1261 373 Pfam Helix-loop-helix DNA-binding domain 131 177 IPR011598 GO:0046983
Acco09g1261 373 PANTHER BHLH TRANSCRIPTION FACTOR 12 306 - -
Acco09g1261 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Acco09g1261 373 MobiDBLite consensus disorder prediction 101 124 - -
Acco09g1261 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 187 IPR036638 GO:0046983
Acco09g1261 373 Gene3D - 115 192 IPR036638 GO:0046983
Acco09g1261 373 MobiDBLite consensus disorder prediction 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1261 Acco-ChrAcco09 27767737 27771380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1261 112 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.384 2.25e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g1261 HLH 4.9e-09 No_clan