Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1258 ATGGATCAGCTTTCTTGGGATGCGTGGCTCTCTGAACTGGAAATGGAAAACGAATCTGTTTTTTTAAGAGAAACAAATTTGGAGCAGTATGATGAAGAAGCTGGAGAGTGTTTTCTCAGAGATATCTTACAGGACCCAACTAATTTATCTTCTGAGAGTGAGGCCATTTTTGCTCCGCCCACCGTGGCGGGAGGTGGCGCCACCACCAACTCCGTCGTGAACTCTCTGCAGTGTGCTTCTCACACAACATCACTAACCGCCTGCGTTCTGTCTTTCGATAAATCCAATGTCGTCACACCAGACATCGCAGATCCTAGCAGTTATTCTTCGAAGCTCAAACGACGCATTGAAGCAGTTAACGATGAGCCGCCGCCGGTGGACGCCGTCAGAGGAACAAAGAAGAGTAGAAGCGGTGCTGATGCGACGGATCACATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACAGAAAGGTTCATAGCCCTCTCAGCCACTATCCCTGGCTTGAAAAAGAACGATAAGGTGACTATTCTGAGCGAAGCTATAAGCTACGTGAAGCAGCTTCAAGAACGTGTGAAGGAGCTAGAGCAAGATACGAAGAACAAGATGATAATAATGGAGAAGCCCTATCATCAAGTGGTGCCGTGTTCTAGAGATGATGATAATGTTGACGGAGGCACGCCGGCAGCGATGAGTGAAATGAACTACTTCAACTGCCACGGCGACAATGATGTGGTGCTGCCAGAGGTGAAAGCAAGAGTCTCGGACAACAAACAAGTGCTGATAAGAATTCTGTGCAAGAAACAGAAATCCACCATGCTTAGAATCCTTGATGAGCTCAAAAGCCTTCATCTCATTGTGTCTGGTAATAGTGTCATGCCCTTCGGATCCTCTACTCTTGATATCACCATCATTGCGCAGATGAATGAGGAATACAGTGTATCGGTGGAGGATATAGTGAAAAGCCTAAGGACGACTCTAAAGTGTAATGGAGATCCCTGCTAG 1005 0.4687 MDQLSWDAWLSELEMENESVFLRETNLEQYDEEAGECFLRDILQDPTNLSSESEAIFAPPTVAGGGATTNSVVNSLQCASHTTSLTACVLSFDKSNVVTPDIADPSSYSSKLKRRIEAVNDEPPPVDAVRGTKKSRSGADATDHIMAERRRRQELTERFIALSATIPGLKKNDKVTILSEAISYVKQLQERVKELEQDTKNKMIIMEKPYHQVVPCSRDDDNVDGGTPAAMSEMNYFNCHGDNDVVLPEVKARVSDNKQVLIRILCKKQKSTMLRILDELKSLHLIVSGNSVMPFGSSTLDITIIAQMNEEYSVSVEDIVKSLRTTLKCNGDPC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1258 334 Gene3D - 131 203 IPR036638 GO:0046983
Acco09g1258 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 213 IPR036638 GO:0046983
Acco09g1258 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Acco09g1258 334 MobiDBLite consensus disorder prediction 122 142 - -
Acco09g1258 334 SMART finulus 145 194 IPR011598 GO:0046983
Acco09g1258 334 Pfam Helix-loop-helix DNA-binding domain 143 189 IPR011598 GO:0046983
Acco09g1258 334 Coils Coil 178 205 - -
Acco09g1258 334 PANTHER BHLH TRANSCRIPTION FACTOR 75 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1258 Acco-ChrAcco09 27696670 27699132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1258 130 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.029 9.63e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g1258 HLH 5.3e-10 No_clan