Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1255 ATGGATTGCTACAGAAGACAATTATACAACAAAGTTTCTCACAAGTCACAAACCATCTTCATCTCCTTGAGGAGAAACATGAATCACAATTTCTTCTTCCTTCCTGACCCATCACCACCGTGCAGCTGGCCAGTTACCACTACAAACGTGCCACCTTCACCACCACCTCTGGAGGGGATCGCCGCTGTGGTAGGTGAGCACGTGCTCTTCGGACACAGCCACACAACAACCTCCACTGCTGTTACCAGTAACAACAAAAAGGACAACAACCTTAACGGCCCCAAAAGTTTCATGCCGGTGCAGAAACAGGATACTCTGTCGTCGGTGAACAAGAGCTACCGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGAATCGGGCGATGCAGGCACTGGCTGGGCACGTTCGACACGGCGGAGGAGGCTGCCCGTGCGTATGACGCGGCAGCGAGGCGACTGAGAGGCGCCAAGGCCAGGACCAACTTCAAGATACCGTCGGTGCTACCGTCCCTGTCACCGCCGTCTTCTTCGTCTTCAAATTCAAGCTCAGATGTAGTGAAAGGCAAAGGGAAGACTTTGGGGAATAATAACAAGAAATGCTGTGTTGTTAACTCGGTGGCTCAGTTGTTCAGTGTGGTGCCTGAAACTGTGAGAGAGAGAAATAATGATCATAATAGGATGACTGGTTCAAGTTCTTCAGGTTTTGGTAACAATGTAGAACTAGACTTGAAGCTAGGTAGATCCACTAGAATGGTCGTGTAG 780 0.5115 MDCYRRQLYNKVSHKSQTIFISLRRNMNHNFFFLPDPSPPCSWPVTTTNVPPSPPPLEGIAAVVGEHVLFGHSHTTTSTAVTSNNKKDNNLNGPKSFMPVQKQDTLSSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFKIPSVLPSLSPPSSSSSNSSSDVVKGKGKTLGNNNKKCCVVNSVAQLFSVVPETVRERNNDHNRMTGSSSSGFGNNVELDLKLGRSTRMVV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1255 259 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 89 218 - -
Acco09g1255 259 Coils Coil 145 165 - -
Acco09g1255 259 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 SUPERFAMILY DNA-binding domain 112 169 IPR016177 GO:0003677
Acco09g1255 259 MobiDBLite consensus disorder prediction 171 196 - -
Acco09g1255 259 CDD AP2 111 170 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 Pfam AP2 domain 112 161 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 MobiDBLite consensus disorder prediction 75 106 - -
Acco09g1255 259 FunFam Ethylene-responsive transcription factor 2 111 170 - -
Acco09g1255 259 Gene3D AP2/ERF domain 111 170 IPR036955 GO:0003700|GO:0006355
Acco09g1255 259 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Acco09g1255 259 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1255 Acco-ChrAcco09 27602387 27603166 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1255 31 175 AP2-EREBP Transcription Factor Family AT1G80580 52.414 1.93e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco09g1255 AP2 3.3e-15 CL0081