Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1245 ATGCACAGAGCACTTATTGTTGTTACATCATATACAAATCCCATCTTTCTTGCTGTTAAACCAAACTTCAATCTCCCTCATAAAAAGGTGATCTTGGCATATATATTTCTTCCACATATGGACCTTCTAAGATCAGAGCCATGTTCATCTGAAAAACCCTCAATGGATTGCCAAACTGAGAAGAGAGACGCACAAAAAGATGATCAGACACAACAACACCCACATGACTCAGCTCCTCCTCTTCTCAATCTAAACCTCTCTAATGAGGATTCAGTGGATGGATCAAAGCCAGAACTCAACCTCATCAATTGTTTTGATTCCAAGTCATCCTTAAACTCCTCAGAATCTTCTCATGACTTGGAACCTCGGATTTTCTCATGCAACTACTGTCAGAGAAAGTTTTATAGCTCACAGGCTCTTGGAGGTCACCAGAATGCACACAAGCGCGAGAGGACTTTGGCGAAAAGAGGACATAAAGTTGGAGCTGCAATTTCAGTAGAATTTGGACAAAGGTACACTAGCATGGCTTCTTTGCCTTTGCATGGCTCATATAACAGATCACTTGGGATTCAAGCACACTCTATGATTCACAAGCCCTCTTATCAAGCTCCAAGTACTCTTGGTTTACCGCGATTCCATGCTCAAAATGCCTGGTGGAGGAAGCCTTTAGATTCACAGCCTACAATTGGGAAGCTTCCTTCTGAAAAAGTTCATATTGGAGATGAATCTGCTTCCTTTTCTGATGGAGTTTCGAGGTCAGCGAGGTTTTCTCCAAATATGGTGGTCAAAGAAGGAATTGGAGCTTATTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAAGACTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 882 0.4161 MHRALIVVTSYTNPIFLAVKPNFNLPHKKVILAYIFLPHMDLLRSEPCSSEKPSMDCQTEKRDAQKDDQTQQHPHDSAPPLLNLNLSNEDSVDGSKPELNLINCFDSKSSLNSSESSHDLEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAAISVEFGQRYTSMASLPLHGSYNRSLGIQAHSMIHKPSYQAPSTLGLPRFHAQNAWWRKPLDSQPTIGKLPSEKVHIGDESASFSDGVSRSARFSPNMVVKEGIGAYWLGSVTHVKSKQEDLQKLDLSLKL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1245 293 ProSitePatterns Zinc finger C2H2 type domain signature. 127 147 IPR013087 -
Acco09g1245 293 MobiDBLite consensus disorder prediction 47 94 - -
Acco09g1245 293 SUPERFAMILY beta-beta-alpha zinc fingers 122 152 IPR036236 -
Acco09g1245 293 MobiDBLite consensus disorder prediction 55 73 - -
Acco09g1245 293 Gene3D Classic Zinc Finger 103 172 - -
Acco09g1245 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 152 IPR013087 -
Acco09g1245 293 MobiDBLite consensus disorder prediction 74 94 - -
Acco09g1245 293 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 40 293 IPR044246 GO:0009788
Acco09g1245 293 FunFam Zinc finger protein 2 103 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1245 Acco-ChrAcco09 27447176 27449170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1245 82 293 C2H2 Transcription Factor Family AT5G25160 46.018 9.96e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco09g1245 None None None