Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1241 ATGAATTGTTTCCTTTGCAGAGAAGAGGCTGTTGTTGCTGCTGAGACAGCTGCACCAGTTATTGGTGAGCCAATGGACATAATGACCGCCGTGCAGCTTGTGCTGAGAAAATCACTGGCTTATGGTGGTCTCGCTTGCGGCCTTCATGAAGGCGCAAAGGTTATTGAAAAGAATGCTGCGCAGCTCTGTGTTCTTGCTGAGGATTGTGACCAACCTGACTACGTAAAACTTGTCAAAGCCCTCTGTGCTGACCACAGTGTTAGCTTGTTGACAGTTCCTAGTGCAAAAACCCTTGGAGAGTGGGCCGGTTTGTGTAAGATCGACTCAGAAGGGAAGGCTAGGAAGGTGGTTGGTTGCTCCTGCGTGGTTGTCAAGGATTTCGGAGAGGAACATGAAGCCTATAACGTTGTTTTGGAGCATGTTAAATCTCACTGA 435 0.4828 MNCFLCREEAVVAAETAAPVIGEPMDIMTAVQLVLRKSLAYGGLACGLHEGAKVIEKNAAQLCVLAEDCDQPDYVKLVKALCADHSVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEEHEAYNVVLEHVKSH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1241 144 SUPERFAMILY L30e-like 24 142 IPR029064 -
Acco09g1241 144 Gene3D - 11 144 IPR029064 -
Acco09g1241 144 FunFam 40S ribosomal protein S12 11 144 - -
Acco09g1241 144 PANTHER 40S RIBOSOMAL PROTEIN S12 18 144 - -
Acco09g1241 144 PRINTS Ribosomal protein S12E family signature 114 127 IPR000530 GO:0003735|GO:0005840|GO:0006412
Acco09g1241 144 PRINTS Ribosomal protein S12E family signature 89 110 IPR000530 GO:0003735|GO:0005840|GO:0006412
Acco09g1241 144 PRINTS Ribosomal protein S12E family signature 34 47 IPR000530 GO:0003735|GO:0005840|GO:0006412
Acco09g1241 144 PRINTS Ribosomal protein S12E family signature 48 64 IPR000530 GO:0003735|GO:0005840|GO:0006412
Acco09g1241 144 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 30 123 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1241 Acco-ChrAcco09 27375846 27376501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1241 21 144 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 75.000 1.36e-65 194