LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco09g1239	ATGGCGGAGAAAAGACCATCTTCTCCACTCTCTGACGTCTTCCTTCTCTCTCTCCCTCTCCTCCTCACCAACCCCCGCTCAGACCATTTCCTCTTTCCCAATCGTCCTTCCTTTCGATTCCGGATTTGTCTCTGTTTACACATAATCTCAACACTAACCACCATGCCTGCCGCCGCCGCCTCATCAGGTTCCGGCCAAACCATCTGCGTCACAGGCGCCGGCGGCTTCATCGCCTCTTGGATTGTCAAGCTTCTCCTAGAGAGAGGCTACACTGTTAGAGGCACCGTCAGAAATCCAGATGATTCTAAGAACGCACACTTGAGAGAGTTGGAAGGAGCACAAGAGAGGCTAACTCTTCATAAGGTTGATCTTCTTGATCTTGATTCTGTGAAATCTGTTGTTAATGGCTGTGATGGCGTCATTCACACGGCCTCTCCCGTCACAGACAACCCCGAAGAGATGGTGGAACCGGCAGTGAATGGAACAAAGAATGTGATCATAGCAGGTGCAGAAGCAAAAGTGAGAAGAGTAGTGTTCACGTCATCAATTGGAGCCGTCTATATGGACCCCAACAGGAACATTGATGAGGTTGTTGATGAGTCTTGCTGGAGCAATCTGGAATATTGCAAGAACACTAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAGGAAGCAGCATGGGATGAGGCAAAAGCAAGAGGGGTGGATTTGGTGGTGGTGAACCCAGTTTTAGTGCTGGGACCATTGCTTCAATCCAACATAAATGCAAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACTCAGGCTTATGTTCATGTTAAGGATGTGGCATTGGCTCATGTTCTGGTTTATGAGACTCCCTCTGCTTCTGGCCGTTATTTATGTTCTGAGAGATCACTCCACCGCGGAGAACTCGTCGAAATCCTCGCCAAGCACTTCCCTGAATACCCAATTCCCACCAAATGTTCGGACGATAAAAATCCAAGAGCAAAACCCTATACATTTTCTAACAAGAAGCTGAAGGATTTAGGGTTAGAGTTTACGCCGGTGGATCAGTGTCTATACGAGACCGTTAAGAGCCTGCAGGACAAAGGCCATCTTCCTCTTCCCACCAAGCAAGCAGAAGAATCTGTTCAGATTAAATCCTAG	1179	0.4801	MAEKRPSSPLSDVFLLSLPLLLTNPRSDHFLFPNRPSFRFRICLCLHIISTLTTMPAAAASSGSGQTICVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLRELEGAQERLTLHKVDLLDLDSVKSVVNGCDGVIHTASPVTDNPEEMVEPAVNGTKNVIIAGAEAKVRRVVFTSSIGAVYMDPNRNIDEVVDESCWSNLEYCKNTKNWYCYGKAVAEEAAWDEAKARGVDLVVVNPVLVLGPLLQSNINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHVLVYETPSASGRYLCSERSLHRGELVEILAKHFPEYPIPTKCSDDKNPRAKPYTFSNKKLKDLGLEFTPVDQCLYETVKSLQDKGHLPLPTKQAEESVQIKS	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco09g1239	392	Gene3D	-	57	392	-	-
	Acco09g1239	392	FunFam	Cinnamoyl-CoA reductase 1	59	390	-	-
	Acco09g1239	392	CDD	FR_SDR_e	69	355	-	-
	Acco09g1239	392	Pfam	NAD dependent epimerase/dehydratase family	68	299	IPR001509	-
	Acco09g1239	392	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	63	371	IPR036291	-
	Acco09g1239	392	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	67	368	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco09g1239	Acco-ChrAcco09	27332910	27338772	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco09g1239	65	331	Monolignol Biosynthesis Gene Families	AT1G80820	74.906	1.13e-143	407