Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1233 ATGGCCAGAGTCAACGAACAAGCCCCGAATCAGAGCCCGAACGACTCGACCAGAAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCAATTAGGTCAGGGAAATTTCGCCAAGGTTTATTACGCCAGGAATCTTGTGACGAACGAGAGCGTCGCGATTAAGGTGATCAAGAAAGAGAAGCTGAAGAAAGAGAGGCTGGTGAGGCAGATCAAGCAAGAGGTCTCAGTGATGCGATTGGTCCGGCATCCTCACATCGTCGAGCTCAAGGAAGTTATGGCCACAAAGGGGAAGATCTTTTTGGTTATGGAATATGTCAAAGGTGGAGAGTTATTCTCCAAGGTCGCGAAAGGCAAGCTCAAGGAAGATGCCGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGGGTTACTCACCGTGATCTGAAGCCTGAGAACCTTCTTTTGGACGAGAACGAAGATCTTAAGGTTTCCGATTTCGGGTTGTCGACGTTGCCGGAGCAGCGTCGATCCGACGGAATGCTCCTCACGCCGTGTGGAACGCCGGCTTATGTGGCGCCGGAGGTTCTGAAGAAGAAAGGGTATGATGGATCTAAAGCTGATCTTTGGTCATGTGGCGTGATTCTCTATGCTCTGCTTTCTGGGTATCTGCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAACGCTGAGTACGAATTCCCAGATTGGATTTCACCCGAAGCTAAGAACTTGATCTTTAATCTTCTAGTCTCCGACCCAGAAAAGAGATACTCGATTCCAGATATCATGAACGACCCCTGGTTTCAGATTGGATTCATGAGACCAATCGCGTTTTCAATTAATAAGGAACCGGGTTTTGATTTCGATGAGGAGGAGAACGAAGTTAAAGAGAAAGAAGGAGAAGTGGTGGTAAGATCAGAGAAACCATCTCGACCATTTTACAATGCGTTTGAGATAATCTCGTCGTTATCAAATGGGTTTGATCTGAGGAGCTTGTTTGAGACACGAAAGAGGTCACCGTCGACGTTCCTGTCGAAGCTTTCGGCTCCAGCGGTCGTTGGGAAGCTTGAGGCGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTTCAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAACTAGGCATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAACTCTCAAAGTCGGCCGGCGATACGCTCGAGTACATAAAGTTCTGTGAGGACGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGCTGGCAGGGAGATAGTACTAATGCTAATAATAGTAATCAAAATTAA 1380 0.4797 MARVNEQAPNQSPNDSTRSILFNKYEMGRQLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDAARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSTLPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALLSGYLPFQGENIMKIYKKAFNAEYEFPDWISPEAKNLIFNLLVSDPEKRYSIPDIMNDPWFQIGFMRPIAFSINKEPGFDFDEEENEVKEKEGEVVVRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSTFLSKLSAPAVVGKLEAVAKKLNFKITGRKDFKVRMQGETEGRKGKLGMTVEVFEVAPEVAVVELSKSAGDTLEYIKFCEDEVRPALKDIVWSWQGDSTNANNSNQN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1233 459 Gene3D Transferase(Phosphotransferase) domain 1 17 324 - -
Acco09g1233 459 Pfam NAF domain 324 379 IPR004041 GO:0007165
Acco09g1233 459 Gene3D Kinase associated domain 1, KA1 325 445 - -
Acco09g1233 459 FunFam Non-specific serine/threonine protein kinase 18 321 - -
Acco09g1233 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 440 - -
Acco09g1233 459 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Acco09g1233 459 Coils Coil 53 73 - -
Acco09g1233 459 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Acco09g1233 459 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Acco09g1233 459 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1233 459 FunFam Non-specific serine/threonine protein kinase 320 444 - -
Acco09g1233 459 ProSiteProfiles NAF domain profile. 320 345 IPR018451 GO:0007165
Acco09g1233 459 CDD CIPK_C 326 440 - -
Acco09g1233 459 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1233 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Acco09g1233 459 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1233 Acco-ChrAcco09 27222454 27223833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1233 6 459 CBL-interacting serine-threonine protein kinases AT5G25110 61.488 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco09g1233 Pkinase 9.7e-77 CL0016