Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1231 ATGGATTATCCATCATGGATCAATACTTCCTTGGACCTCAACCTTAATCCTAGTTCCAGAGTCACTGAAGAGACTTCTAAAAAGGAAGTGGAAAGCAAATTTTTTGCATTAGAGTTGAAGTCATCTCCTTCAAGACAAGAGAGGAGTGGTGATCTGGAGGAGGAGTTGAAGAGGGTGAGTGCCGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAGAATTACAATACTTTGAGGAACCATTTGTCTGAATATATAAGAAAGAACAATAACAATAATAGTTCAGAAAAGGAGATGAGCCCTCCAAAGAAGAGGAAGTCTGATCAAAGCAGCAATAATAACAATAGCAATCCAGTGGGGGTTTATGGAAACAACAGTAACAATTCTGAGAGCAGCTCAGCTGATGAAGAAGAATCAAGCAAGAAACCAAGGCAAGAGATCATCAAAGCAAAAATCTCCAAAGTTTATGTCAGAACACCAGCATCTGATACCACCCTTATTGTGAGAGATGGATATCAGTGGAGGAAATATGGCCAAAAGGTGACCAGAGACAACCCTTGTCCAAGAGCTTACTTCAAATGCTCTTTTGCTCCCTCATGCCCTGTCAAAAAGAAGGTTCAAAGAAGTGCGGATGATCAATCAATAGTGGTGGCAACTTATGAAGGAGAGCATAATCATGAACCACCTTCACATATGGAGGCTTCAGCATCAGGTTCAAGCAGAGGCTTAGTACAAGGCTCATCATCTTCTCGAAGACCTTCTCCTCCAAAAGTTACAGTTGACATGAAACGGTCAAAGTCCTTCAATGAATCTATGAACTCACTTCCAAAGCTAGATTCTTCTGAAGTCCCTCAGGTTTGGGTGGAACAGATGGCTACTTCCTTAACCAAGGATCCAAATTTCAGATCAGCACTTTTAGCAGGCATTTCAGGAAAAATGTTGCACAAGAATTAG 960 0.4115 MDYPSWINTSLDLNLNPSSRVTEETSKKEVESKFFALELKSSPSRQERSGDLEEELKRVSAENKKLTEMLTEMCENYNTLRNHLSEYIRKNNNNNSSEKEMSPPKKRKSDQSSNNNNSNPVGVYGNNSNNSESSSADEEESSKKPRQEIIKAKISKVYVRTPASDTTLIVRDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSADDQSIVVATYEGEHNHEPPSHMEASASGSSRGLVQGSSSSRRPSPPKVTVDMKRSKSFNESMNSLPKLDSSEVPQVWVEQMATSLTKDPNFRSALLAGISGKMLHKN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1231 319 MobiDBLite consensus disorder prediction 267 282 - -
Acco09g1231 319 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1231 319 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1231 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 315 IPR044810 GO:0003700
Acco09g1231 319 SUPERFAMILY WRKY DNA-binding domain 166 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g1231 319 MobiDBLite consensus disorder prediction 1 21 - -
Acco09g1231 319 Gene3D WRKY domain 153 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g1231 319 MobiDBLite consensus disorder prediction 108 135 - -
Acco09g1231 319 FunFam WRKY transcription factor 40 155 232 - -
Acco09g1231 319 MobiDBLite consensus disorder prediction 234 257 - -
Acco09g1231 319 Pfam WRKY DNA -binding domain 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1231 319 Coils Coil 49 76 - -
Acco09g1231 319 MobiDBLite consensus disorder prediction 87 147 - -
Acco09g1231 319 MobiDBLite consensus disorder prediction 1 30 - -
Acco09g1231 319 MobiDBLite consensus disorder prediction 225 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1231 Acco-ChrAcco09 27143475 27144845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1231 52 319 WRKY Transcription Factor Family AT1G80840 53.957 6.40e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g1231 WRKY 2.3e-23 CL0274