Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1189 ATGGTTTTCATACGGGCATTGTTCATCCTCCTACTTCAATACCAAATTTCAACATTTAGTCCGACACATCCAAGGCATCACCATTTTTCTCACTCTCTTCTCACAGATAAGGCTGCTCTTCTGGAATTCAAGAAAACTATCATACTTGATCCACATTCCACACTTTCTAACTGGGATGAATCTGTTCATGCGTGCAATTTCACTGGCGTTAAGTGCGATAAACCTCAGCACCGAGTCACTGAGCTAATCCTCACTGAAACTCGTCTTGTGGGGTTGCTTTCACCCTTCCTTTCCAATCTTACTGGACTGCACATACTTGACATTGTTGACAATCACTTATTTGGCATTATCCCACCAGAACTTTCCTCCCTTAGACGCCTCCATCGACTCCATCTCGAGGGGAACAACTTGCATGGTTCCATACCACATTCCTTTTCCCAGCTTTCTAAACTTAATGTGCTGCTAATCAGAGATAGTAACATAACAGGTTCACTTTCTCCATCTCTTTTCTCCAATTGCACACTGGAAATTGTGGACCTTTCTAGCAACGTCCTCAGTGGTAAGATCCCTGAGGAGATTGGAAACTGTCAGGGTCTATGGAGTCTCAGTCTTTACAACAATCAATTTACTGGACAGATTCCTCTCTCTCTAAGTAATTTGTCACTTGTAAATTTAGACGTAGAGTACAACCTATTGTCTGGAGAATTGCCTTTAGAGTTTGTAAGCACATGTCCTGGTGGTCTTCTTTACCTGCATTTGTCATACAATTATATGGTAAGTCATGATCATAATAAAAATCTTGATCCATTTTTTGCTGCTCTTAGAAACTGCAGTAGACTAGAGGAGCTTGAATTGGCTGGCATGGGCCTCGGGGGAACGTTCTCCGATACCATATGTCAAGTTGGTATCAAACTAAAAAGCCTGCAGCTGCAGGAAAATCAAATATATGGATCAATCCCTGACACAGTATCAAATCTTTCCAGCCTTATGATCCTGAATTTAACATCCAATCTTCTCAGTGGAACCATTTCGCCAGAGATCAGCATGTTGTCAAACTTGGAACAACTTTTCTTATCAAACAACCACTTCAAGTCAGAAATTCCAGAAGCACTGGGCAATTGTCTAAATCTGGGTCTCTTAGATCTCTCACACAATGAATTTACTGGAGGGATTCCGGAAAGTCTGGGAAAGTTGGGTCGACTAAATTATTTGTTTCTCAATAATAACCACCTCACTGGAAATGTACCTTCTACATTAGGACAGTGCATTGATCTGTATAGGCTTGACTTGTCCTATAATAGATTAACAGGAAGAATCCCACCAGAAATCTCAGGCCTTCATGAAATTAGAATCTTCATAAATCTCTCACATAACCAACTAGAAGGTCCTCTGCCAATTGAGCTCAGGAAACTAGAAAAGGTTCTAGAGATGGATTTTTCATCAAATTACCTAACTGGAAGTATCTTCCCTAAGATAGCAAGCTGCATTGCCGTATCGATGATAAATTTTTCAAACAATGTTCTCCAAGGTGAGCTTCCTGAATCCTTAGGTGAACTAAAGAACCTTGAAACTTTCGATGTTTCACGAAACAATTTGTCTGGATTGATCCCCAAAACTTTTAGTAAAATAGATACACTTTCTTTCCTCAATCTGTCATACAACAACCTAGAAGGAATGGTTCCATCTGGTGGCATCTTTGATTCAGCATCAAATCTATCATTCTTAGGAAACCCACATCTTTGTGGAACAATCACAGGCAAAGTTTCATGCTTTCAAAAGGGATATTGGCTCAGAAATTGCCTGTTCTCGCTTATTTTCATCTTGGTCATCTGCATAATCTTGTCAATGATTTGCTGCATAATTGGATGTAAGCGTCTTAAAGTGATTATTTCTGCCCATGGAACTGAGTTAGATGGAAAACCAGCTAGACGTGAACTGATAAGTAACTTCCCAAGAATCACATACAAGGAACTATCAGAGGCCACTGAAGGATTTGATGATCAGAGACAAGTAGGATCAGGTAGCTATGGATGTGTCTATAGAGGAGTTCTTCCAGATGGAACGCCAATAGCAGTCAAGGTGCTGCATTTGAAGTCTGGAAATTCCACCAAGAGCTTCAATAGAGAATGTCAAGTTTTAAAGAGGATTCGACACAGGAACCTGATAAGGATTATCACTGCATGTAGTCTGCCTGATTTTAAAGCTCTTGTTCTGCCTTATATGGCCAATGGGAGTTTGGAGGGCCATCTCTATGCTTCTTTGGGATCTTCTGACCTGAGTATCATCCAGAGGGTGAATATTTGCAGTGACATAGCTGAAGCTTTGGCCTATCTGCATCATCATTCTCCAGTCAGAGTCATTCATTGTGATCTAAAACCAAGCAATGTTCTTCTTAATGATGACATGACAGCAGTAGTTTCAGATTTTGGGATTGCAAGGTTAATTATGAGTGTTGGAGGAGGAGGAAATACTGGGTTTAATGATAACATGGGGAGCTCCACTGCAAATTTGTTATGTGGATCTACCGGATACATTGCACCAGAGTACGGATTCGGATCAAATATATCTACAAAAGGAGATGTGTACAGCTTTGGTATTCTTGTTCTTGAGATGGTGACTAGAAAGAGGCCAACAGATGACATGTTTTCTGGTGGTTTAAGCCTTCACAAATGGGTAAAACTTCATTATCATGGAAGGTTAGAAGAAGTGATAGACTCGTGTTTGGTTACAGCTTCAAGAGATCAGTCACAGGACGTGAAAAGAATGTGGGAAGTTGCAATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACACAGGAATCACCTTGTACAAGGCCTAGTATGCTTGATGTAGCAGATGATTTGCATCGTCTCAAGAGATACCTTACTGGGGACACAACTAGAACTTTTGCCTCGTCTCATGGGATTTCATCTTCTACTACAGATTATTCTGATGTAGCCCTAAAACTAATATGTTTTGTAACTAGTAAATCCATGGTGGATGAAACAGGTACTAACAGTCAAATTGTGGAAAATCGAAGCTCTCTCAAATTCATCATTATTGATGGAATCACTGTCTACTTTAGCATTGTAGTATTGCGACAATTTGGCCAACACCTTCGACTCTCAAGTGGAAAGTTGGAGAGGTAA 3150 0.4038 MVFIRALFILLLQYQISTFSPTHPRHHHFSHSLLTDKAALLEFKKTIILDPHSTLSNWDESVHACNFTGVKCDKPQHRVTELILTETRLVGLLSPFLSNLTGLHILDIVDNHLFGIIPPELSSLRRLHRLHLEGNNLHGSIPHSFSQLSKLNVLLIRDSNITGSLSPSLFSNCTLEIVDLSSNVLSGKIPEEIGNCQGLWSLSLYNNQFTGQIPLSLSNLSLVNLDVEYNLLSGELPLEFVSTCPGGLLYLHLSYNYMVSHDHNKNLDPFFAALRNCSRLEELELAGMGLGGTFSDTICQVGIKLKSLQLQENQIYGSIPDTVSNLSSLMILNLTSNLLSGTISPEISMLSNLEQLFLSNNHFKSEIPEALGNCLNLGLLDLSHNEFTGGIPESLGKLGRLNYLFLNNNHLTGNVPSTLGQCIDLYRLDLSYNRLTGRIPPEISGLHEIRIFINLSHNQLEGPLPIELRKLEKVLEMDFSSNYLTGSIFPKIASCIAVSMINFSNNVLQGELPESLGELKNLETFDVSRNNLSGLIPKTFSKIDTLSFLNLSYNNLEGMVPSGGIFDSASNLSFLGNPHLCGTITGKVSCFQKGYWLRNCLFSLIFILVICIILSMICCIIGCKRLKVIISAHGTELDGKPARRELISNFPRITYKELSEATEGFDDQRQVGSGSYGCVYRGVLPDGTPIAVKVLHLKSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLEGHLYASLGSSDLSIIQRVNICSDIAEALAYLHHHSPVRVIHCDLKPSNVLLNDDMTAVVSDFGIARLIMSVGGGGNTGFNDNMGSSTANLLCGSTGYIAPEYGFGSNISTKGDVYSFGILVLEMVTRKRPTDDMFSGGLSLHKWVKLHYHGRLEEVIDSCLVTASRDQSQDVKRMWEVAIGELIELGILCTQESPCTRPSMLDVADDLHRLKRYLTGDTTRTFASSHGISSSTTDYSDVALKLICFVTSKSMVDETGTNSQIVENRSSLKFIIIDGITVYFSIVVLRQFGQHLRLSSGKLER 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1189 1049 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Acco09g1189 1049 Gene3D Ribonuclease Inhibitor 156 262 IPR032675 -
Acco09g1189 1049 Pfam Leucine Rich Repeat 521 542 IPR001611 GO:0005515
Acco09g1189 1049 Gene3D Transferase(Phosphotransferase) domain 1 741 973 - -
Acco09g1189 1049 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 645 740 - -
Acco09g1189 1049 Gene3D Phosphorylase Kinase; domain 1 646 740 - -
Acco09g1189 1049 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 173 956 - -
Acco09g1189 1049 SUPERFAMILY L domain-like 329 582 - -
Acco09g1189 1049 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 741 968 - -
Acco09g1189 1049 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1189 1049 SUPERFAMILY L domain-like 33 259 - -
Acco09g1189 1049 ProSiteProfiles Protein kinase domain profile. 665 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1189 1049 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Acco09g1189 1049 Pfam Protein kinase domain 666 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1189 1049 FunFam Leucine-rich repeat receptor-like protein kinase 34 191 - -
Acco09g1189 1049 CDD STKc_IRAK 671 958 - -
Acco09g1189 1049 Gene3D Ribonuclease Inhibitor 35 155 IPR032675 -
Acco09g1189 1049 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 592 - -
Acco09g1189 1049 SMART LRR_typ_2 519 542 IPR003591 -
Acco09g1189 1049 SMART LRR_typ_2 350 374 IPR003591 -
Acco09g1189 1049 SMART LRR_typ_2 398 422 IPR003591 -
Acco09g1189 1049 SMART LRR_typ_2 124 148 IPR003591 -
Acco09g1189 1049 Pfam Leucine rich repeat 304 363 IPR001611 GO:0005515
Acco09g1189 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Acco09g1189 1049 Gene3D Ribonuclease Inhibitor 263 591 IPR032675 -
Acco09g1189 1049 SUPERFAMILY Protein kinase-like (PK-like) 646 955 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1189 Acco-ChrAcco09 26420957 26424886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1189 27 967 Receptor kinase-like Gene Family AT3G47570 33.922 1.41e-155 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco09g1189 Pkinase 1.3e-40 CL0016