Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1183 ATGATCATGGCGAAAATGTCACAGAGGAAGGTGAAGAACGATGAAAATAGCAATACGCCTTCAAACAAGAACACGAAACGGACTCGCAAAAGCATTCCCAGGGACTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGTGTCACTAGGCATCGTTGGACGGGTCGTTATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGGGGCATATGATGATGAAGAAACTGCTGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATCCTCAATTTTCCTCTCACAAATTATGAACAAGAGCTCAAGGAGATGGAGGGTCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGTCTCAAAGTACAGAGGCGTAGCAAGACACCATCACAATGGAAGATGGGAGGCTCGGATTGGCAGAGTCTTCGGCAACAAATATCTTTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCTTATGATATGGCAGCCATAGAATACAGAGGACTTAACGCTGTTACAAACTTTGACCTCAGCCGTTATGTCAACTGGCTCCGTCCTAAAAGCCAAGATTCCCATGAAAACCCTACCACTGATAACAGTACCGAGTCTGGATCAAGCTCTAATAAGCCTGAACTTGAATTTGGTTTCGGGTCCCACCAGCTCAGTTCAAACTCCGACGACACACTGGCGGTGCCACCACAATCCGGCGGTGGGGCTCCGCCGACGTCATCGGCACTAGGGCTCCTCTTGCAATCGTCAAAGTTTAAGGAAATGCTGGAGAGATCTTCATCAGGTGGAGATCAACATAATAATAATAATTATCCTGCAACAATAGAAACTTCAGAATCAAAGCCTCCTCGTCGTTCATTTCCTGAAGATATTCAAACATTCTTTGATTGTCATGATTCAAGCAGCTACACTGAAACTGATGACATCATATTTGGTGATTTGAGCGCAATTGCTGCTCCTATTTTCCATTGCGAGCTGGATGCTTAG 1068 0.456 MIMAKMSQRKVKNDENSNTPSNKNTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEETAARAYDLAALKYWGQDTILNFPLTNYEQELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYVNWLRPKSQDSHENPTTDNSTESGSSSNKPELEFGFGSHQLSSNSDDTLAVPPQSGGGAPPTSSALGLLLQSSKFKEMLERSSSGGDQHNNNNYPATIETSESKPPRRSFPEDIQTFFDCHDSSSYTETDDIIFGDLSAIAAPIFHCELDA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1183 355 SUPERFAMILY DNA-binding domain 141 202 IPR016177 GO:0003677
Acco09g1183 355 PRINTS Ethylene responsive element binding protein signature 182 202 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 MobiDBLite consensus disorder prediction 1 47 - -
Acco09g1183 355 FunFam AP2-like ethylene-responsive transcription factor 141 202 - -
Acco09g1183 355 Pfam AP2 domain 42 98 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 Pfam AP2 domain 141 192 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 ProSiteProfiles AP2/ERF domain profile. 43 106 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 Gene3D AP2/ERF domain 43 108 IPR036955 GO:0003700|GO:0006355
Acco09g1183 355 Gene3D AP2/ERF domain 141 202 IPR036955 GO:0003700|GO:0006355
Acco09g1183 355 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 274 - -
Acco09g1183 355 MobiDBLite consensus disorder prediction 211 268 - -
Acco09g1183 355 SUPERFAMILY DNA-binding domain 42 107 IPR016177 GO:0003677
Acco09g1183 355 CDD AP2 141 202 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 SMART rav1_2 43 112 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 CDD AP2 42 106 IPR001471 GO:0003700|GO:0006355
Acco09g1183 355 MobiDBLite consensus disorder prediction 281 308 - -
Acco09g1183 355 FunFam AP2-like ethylene-responsive transcription factor 42 108 - -
Acco09g1183 355 MobiDBLite consensus disorder prediction 281 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1183 Acco-ChrAcco09 26343473 26347269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1183 39 238 AP2-EREBP Transcription Factor Family AT5G57390 61.574 2.04e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco09g1183 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1183 09 26343473 26347269 Acco09g1183 09 26343473 26347269 ECH