Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1180 ATGAAGGAGACGACGGAGAAAAAGAAGTACCCTATTGGCCCTGAGAATTATGAACTGCTCGAGGAAATTGGTCAGGGGGTCAGTGCTCATGTGCATCGTGCTCGTTGCATTACTCTTGACGAGATAGTTGCCATTAAAATCCTCGATTTTGAGCGAGAAAATTGCGATCTTAATAATGTTTTTCGTGAAGCACAGACTATGACCTTGGTTGACCACCCTAATGTCGTCAAATCAAACTGCTCCTTTGTTAGTGATCATAATCTATGGGTTATCATGCCATATATGGCTGGTGGTTCGTGTCTTAACATATTGAAATCCGCCCACCCAGATGGTTTTGAGGAGGTTGTAATAGCAACAATATTGCGAGAGGTATTGAAGGGTTTAGAGTACCTTCATCATCAGGGCCATATACATAGAGATGTTAAAGCCGGGAACATTTTAATTGATTCACGTGGTGCAGTCAAGCTGGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACAAGAAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAGCTGCATGGTTATGACTTCAAAGCAGATATATGGTCTTTTGGCATAACAGCATTGGAGCTTGCCCATGGGCACGCTCCTTTCTCAAAGTATCCTCCCTTGAAGGTACTTATTATGACATTGCAAAATGCACCGCCTGGCCTTGATTATGAACGTGACAAGAAGTTCTCTAAGTCATTTAGGAAGATGATTGCTGACTGCTTGGAAAAAAATCCTTCAAAACGACCCAGTGCAAGCAAGTTGCTAAAGGGCACCTTCTTTAAGCAAGCTCGCTCAATTGATTATATTTTTCGAAAGCTTTTGGAGGGGCTGCCTAATTTAGGTGATCGCATCAAGGCTCTAAAGAGGAAAGAAGAAGATATGCTTGCCAAAGAACAAATGCCTGATGGGCAGAAGGAGGAATTATCACAGAATGAATACAACCGAGGACTTAGTAGCTGGAACTTCAATATTGAAGAAATGAAAGCTCAGGCTTCATTGGATTTTGATGATGCAATATCTGAAATCCCAGGAGGGAGTTCTAATAGTCTATCCGCAATTGATGTACAATCACCACGTGCAAACAACTCTCAAATTGCTGATATGGAAGATAACGAAGAGATCCAAAATCAATCACCTGCTGTACCTGCAGTAGACTCTACAACAACTGATGCCAAGGTCAGAAGTGGAAATTCTAATGATGACTCTATCACCAGTTTAAGCCATGAACATTACTCATCACAGAGTGCTTCACTGTGTCTTGAAGATAATGCGTTGGACCATAATTTGAGTGAAAAATGTGAAATGGAGAATGGTGGAAGACAGGTGGAGCCTACCCATTCTTATCACAGAAGATGCTCATCAAGCATCGTACCTGAAGTTACTCACACAACTGCTCGTGGAGAAATGTAA 1464 0.4228 MKETTEKKKYPIGPENYELLEEIGQGVSAHVHRARCITLDEIVAIKILDFERENCDLNNVFREAQTMTLVDHPNVVKSNCSFVSDHNLWVIMPYMAGGSCLNILKSAHPDGFEEVVIATILREVLKGLEYLHHQGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPLKVLIMTLQNAPPGLDYERDKKFSKSFRKMIADCLEKNPSKRPSASKLLKGTFFKQARSIDYIFRKLLEGLPNLGDRIKALKRKEEDMLAKEQMPDGQKEELSQNEYNRGLSSWNFNIEEMKAQASLDFDDAISEIPGGSSNSLSAIDVQSPRANNSQIADMEDNEEIQNQSPAVPAVDSTTTDAKVRSGNSNDDSITSLSHEHYSSQSASLCLEDNALDHNLSEKCEMENGGRQVEPTHSYHRRCSSSIVPEVTHTTARGEM 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1180 487 CDD STKc_OSR1_SPAK 15 278 - -
Acco09g1180 487 FunFam Serine/threonine-protein kinase BLUS1 6 94 - -
Acco09g1180 487 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Acco09g1180 487 ProSiteProfiles Protein kinase domain profile. 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1180 487 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Acco09g1180 487 Gene3D Transferase(Phosphotransferase) domain 1 98 332 - -
Acco09g1180 487 SUPERFAMILY Protein kinase-like (PK-like) 15 293 IPR011009 -
Acco09g1180 487 Pfam Protein kinase domain 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1180 487 SMART serkin_6 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1180 487 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 454 IPR047173 GO:0043539
Acco09g1180 487 MobiDBLite consensus disorder prediction 389 427 - -
Acco09g1180 487 FunFam serine/threonine-protein kinase BLUS1 isoform X1 98 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1180 Acco-ChrAcco09 26299992 26303150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1180 6 429 MAP Kinase Kinase Kinase Kinase AT1G79640 72.770 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Acco09g1180 Pkinase 1.9e-60 CL0016