Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco09g1174 | ATGAGACCTACCCAGCCGCCGCAGGGCATGGGAACGAGCGATCAGGAGCGGCCGTGCCGACGTAAGAAGAATTTGAGCTTGCCTTTGCCGCTGCGGGACACATCCTTTGCCATGCCTCTTCCTCTGCCGCCATCCAACTCAGTACCGTCGACGAGTCATCAATTGGCGTCCTCTCAGTCTCACCAGCAGGTACCATTCGTCGAGCTCGAGCGACTCAATAGGATTGGTAGTGGCAGCGGAGGCACTGTCTACAAGGTCTGTCACCGACCTACCGGTCGTTTTTACGCGCTTAAGGTTATATACGGTACGCACGAGGAATCCGTCCGCCGTCAGATCCATCGAGAAATCCAGATCCTCCGCGGTGTGAATGACCAGAACGTGGTCAAGTGCCATGATATGTACGATCATAGCGGCGAAATCCAGGTGCTTCTTGAGTTCATGGATGGTGGCTCCTTAGAAGGGAGACGCATCCCCAGTGAAAGACAGCTGGCGGATGTAGCACGCCAGATCCTCCGTGGCCTGGCCTACCTCCACCGCCTTCATATCGTTCATAGAGATATTAAGCCCTCGAATTTATTAATCAATTCGCTGAAGCAGATTAAGATTGCCGACTTCGGAGTGGGTCGGATCCTGGCACAAACTATGGATCCGTGTAATTCGTCGGTGGGTACCATTGCTTATATGAGCCCTGAGAGAATCAATACAGACATCAATGATGGGCGATACGATGCGTATGCGGGAGATATATGGAGCCTTGGGGTCAGTATATTAGAATTCTACATGGGTAAATTCCCATTCGCGGTGGGAAGGCAAGGTGATTGGGCAAGCTTGATGTGTGCAATTTGTATGTCTCAGCCGCCGGAGGCGCCCCCGACGGCGTCGATGGAGTTCCGGGATTTCATATCGCGCTGTTTACAGAGAGATCCGTCACGGAGGTGGTCGGCTGCGCGCTTGTTGGGGCACCCATTTATATTCCAGGGAATAGGAAACCAGAACCAGGTTCATCAGAATCTTCATCAATTGCTACCTCCGCCTGGACCTCCTTCTTCCTAG | 1053 | 0.5299 | MRPTQPPQGMGTSDQERPCRRKKNLSLPLPLRDTSFAMPLPLPPSNSVPSTSHQLASSQSHQQVPFVELERLNRIGSGSGGTVYKVCHRPTGRFYALKVIYGTHEESVRRQIHREIQILRGVNDQNVVKCHDMYDHSGEIQVLLEFMDGGSLEGRRIPSERQLADVARQILRGLAYLHRLHIVHRDIKPSNLLINSLKQIKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGRYDAYAGDIWSLGVSILEFYMGKFPFAVGRQGDWASLMCAICMSQPPEAPPTASMEFRDFISRCLQRDPSRRWSAARLLGHPFIFQGIGNQNQVHQNLHQLLPPPGPPSS | 350 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco09g1174 | 350 | CDD | PKc_MAPKK_plant_like | 68 | 326 | - | - | |
| Acco09g1174 | 350 | SUPERFAMILY | Protein kinase-like (PK-like) | 70 | 343 | IPR011009 | - | |
| Acco09g1174 | 350 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 148 | - | - | |
| Acco09g1174 | 350 | FunFam | Mitogen-activated protein kinase 2 | 149 | 336 | - | - | |
| Acco09g1174 | 350 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Acco09g1174 | 350 | ProSiteProfiles | Protein kinase domain profile. | 69 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco09g1174 | 350 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
| Acco09g1174 | 350 | SMART | serkin_6 | 69 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco09g1174 | 350 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 182 | 194 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco09g1174 | 350 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 32 | 326 | - | - | |
| Acco09g1174 | 350 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 340 | - | - | |
| Acco09g1174 | 350 | Pfam | Protein kinase domain | 70 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco09g1174 | Acco-ChrAcco09 | 26220056 | 26221108 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco09g1174 | 1 | 340 | MAP Kinase Kinase Gene Family | AT1G51660 | 67.806 | 4.15e-165 | 463 |
Transcription factors information