Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1161 ATGGAGCCGTCTATTATCTCTCGAAGCGCTAATTCCTCCACCAATGGCCTTCTCTCCGTCAATATCCCCAGCCACAACGATGTCGAACCCCTACCTCCTCAGATCAACGACGATGATGAAGACGCTATTGATCCCGATGATCCTTTCGATGTCACTCACACCAAGAATGCGCCGGTCGAAATGCTCCAGCGATGGAGACATGCGACTCTTGTTCTCAATGCTTCTCGGCGTTTTAGATATACTCTGGACTTGAAAAGGGGAGAGCAGGAAGAGCATAAGAAAGGTTTGATAAGATCCCATGCCCAAGTCGTACGAGCAGCGCTGCTTTTCAGATTAGCTGGTGAACGTGATCTAGCGGTAGGCAAAAGAGTGTCAGCCTCAATCTCAGGTGATAACTTCGGAGTTGAGCTCGAACAACTTGCTTCAATGTCCAAGGATCAGAATATTTCTACTTTGCAAGAATGTGGAGGGGTTAAAGGCTTATCAGATTTATTAAAGTCAGATCTTGAGAAAGGAATTAATGGAGATGACGATGATATGTTAAAAAGAAAAGTGACGTTTGGGACGAATACATACCCTAAGAAAAAGGGGCGGACTTTCTGGAATTTTCTATGGGATGCTTGGCAAGATCTGACCCTTATCATATTGATTATAGCAGCTGCGGTGTCATTGGCACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGATGGTATGATGGAGGAAGCATCGCCTTGGCTGTTTTTCTTGTCATTATAGTAACAGCTACCAGTGATTATCGCCAATCTCTGCAGTTTCAGAATTTGAATTCTGAAAAACAAAATATACAATTGGAGGTCATTAGAGGCGGTAGAGCAACAAAGATATCAATATTTGATGTTGTTGTTGGTGATGTTGTACCTCTCAAAATAGGAGACCAGGTTCCTGCTGATGGAGTTATAATCACTGCTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAAGACAACAAAGCACCTTTTTTGATGTCTGGCTGCAAAGTAGCAGATGGCGTTGGTGTTATGCTGGTAACTGGGGTTGGTATCAATACGGAGTGGGGGTTGTTGATGGCAAGCATCTCTGAAGATTCTGGAGAAGAGACTCCGTTGCAGGTACGTTTGAATGGAGTTGCAACTTTTATCGGTACAATAGGTCTTGTAGTAGCTGTTGTTGTGCTAGTGGTCCTATTGGTCAGATATTTTACTGGCAACACGAATGATGAAAATGGAAATGTCGAATTTGTTCCTGGCCAGACGAGTTTCAGTAGTGCAATAGATGGGGTTGTCGAAGTTTTTACTATTGCTGTCACAATTGTTGTTGTTGCAGTTCCTGAAGGTCTTCCTCTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTGCGAAGGCTTTCAGCCTGTGAAACTATGGGCTGTGCAACAACAATTTGCAGTGATAAAACAGGAACGTTAACCTTGAATCAGATGACTGTGGTTGAGGCATGCGTTGGGAGGAAGAAACTGAATTCACCTGATGACTCATCAAAGTTGAATCCAGAAGGTTTATCTCTGATAAAAGAGGGCATTGCACAGAATACAACTGGAACTGTGTTTGTGCCTAAGGATGGTGGAGAGACTGAGGTTTCAGGGTCTCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGAATGGATTTTGATCGTATCAGATCAAATTCATCAGTTCTCCATGTATTTCCCTTCAATTCTGAGAAAAAGCGTGGTGGTGTCTTGCTGAAGCAGAATGTGAACTCCACAGTACATATACATTGGAAAGGCGCTGCAGAGATAGTACTAGGAAAGTGCACTCAATATCTTGATTCAAATGGTGGCTTGCTTTCTATTGAAGAAGAGAAGGATTTTTTCAAGGCAGCTATTGAAGACATGGCTGCTCGCAGTTTGCGGTGTGTTGCCATTGCATACAGGCCATATGAATTGGACAAAGTTCCCTATAAAGAGGAGGATTTGGCCCAGTGGTCCCTACCTGAGGATGAGCTTGTTTTGCTTGCTATAGTTGGTATAAAGGATCCCTGTCGCCCCGGTGTCAAAGAAGCAGTAGCAGTATGCACTGCAGCTGGTGTTAAGGTGCGCATGGTTACGGGAGACAATCTTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCACATTTAGATGCTGTTGAACCAGTTATTATTGAAGGAAAGACATTCCGGGCGTTATCTGAAAACGAAAGGGAAGAAGTTGCTCAACAAATAACAGTCATGGGGAGGTCTTCTCCAAATGACAAGCTTTTACTTGTTCAAGCTCTGCGGAAAGCAGGTGAAGTTGTTGCTGTTACTGGAGATGGAACCAATGATGCTCCCGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCCGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGACGATAACTTTTCGTCAGTTGTAAAGGTCGTTCGCTGGGGACGTTCTGTATCTGCAAATATTCAGAAATTTATACAGTTCCAGCTCACAGTTAATGTTGCAGCTCTTGCGATAAATGTTGTGGCGGCAATTTCTTCGGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGCTTAACCTTATCATGGACACACTTGGGGCCCTGGCACTAGCTACGGAACCGCCTACCGACCACCTTATGCACAGACCACCAGTTGGCCGAAGGGAACCTCTCATAACGAATAACATGTGGAGGAACTTGCTTGTACAGGCTGTATATCAAATAACGGTTCTCCTTGTTCTTAATTTTGCTGGAGAAAGCATTCTCCATGGTGACTCTAAAACCAAAACCTCGCAACTGAAGAATACCGTGATTTTCAATGCATTTGTCTTCTGCCAAATTTTCAATGAGTTCAATGCTCGAAAACCAGATCAAATGAACGTATTCACTGGAGTGACCAAGAACCGTCTCTTTCTGGGAATTGTGGGAATGACCATTCTACTTCAGGTAATCATAATCGAGTTCCTTGGAAAGTTCACCAGCACGGTGAAGCTTGATTGGGAGATATGGCTGGTTTCGATCATCATTGGTCTCGTCAGTTGGCCTCTTGCTGTGCTTGGAAAGTTCATTCCAGTTCCAAAAACACCATTATCTCGCAAATTTAAGAAGATGCTTATGCGATTTAAGAGATCAAAAACTCCTGCTACACAGCAATAG 3285 0.4368 MEPSIISRSANSSTNGLLSVNIPSHNDVEPLPPQINDDDEDAIDPDDPFDVTHTKNAPVEMLQRWRHATLVLNASRRFRYTLDLKRGEQEEHKKGLIRSHAQVVRAALLFRLAGERDLAVGKRVSASISGDNFGVELEQLASMSKDQNISTLQECGGVKGLSDLLKSDLEKGINGDDDDMLKRKVTFGTNTYPKKKGRTFWNFLWDAWQDLTLIILIIAAAVSLALGIKTEGLEEGWYDGGSIALAVFLVIIVTATSDYRQSLQFQNLNSEKQNIQLEVIRGGRATKISIFDVVVGDVVPLKIGDQVPADGVIITAHSLAIDESSMTGESKIIHKDNKAPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDSGEETPLQVRLNGVATFIGTIGLVVAVVVLVVLLVRYFTGNTNDENGNVEFVPGQTSFSSAIDGVVEVFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMTVVEACVGRKKLNSPDDSSKLNPEGLSLIKEGIAQNTTGTVFVPKDGGETEVSGSPTEKAILSWAVKLGMDFDRIRSNSSVLHVFPFNSEKKRGGVLLKQNVNSTVHIHWKGAAEIVLGKCTQYLDSNGGLLSIEEEKDFFKAAIEDMAARSLRCVAIAYRPYELDKVPYKEEDLAQWSLPEDELVLLAIVGIKDPCRPGVKEAVAVCTAAGVKVRMVTGDNLQTAKAIALECGILASHLDAVEPVIIEGKTFRALSENEREEVAQQITVMGRSSPNDKLLLVQALRKAGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFSSVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAISSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNNMWRNLLVQAVYQITVLLVLNFAGESILHGDSKTKTSQLKNTVIFNAFVFCQIFNEFNARKPDQMNVFTGVTKNRLFLGIVGMTILLQVIIIEFLGKFTSTVKLDWEIWLVSIIIGLVSWPLAVLGKFIPVPKTPLSRKFKKMLMRFKRSKTPATQQ 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1161 1094 NCBIfam HAD-IC family P-type ATPase 437 528 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1161 1094 NCBIfam HAD-IC family P-type ATPase 772 886 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1161 1094 Pfam haloacid dehalogenase-like hydrolase 495 820 - -
Acco09g1161 1094 Gene3D - 58 111 - -
Acco09g1161 1094 Gene3D - 495 851 IPR023214 -
Acco09g1161 1094 MobiDBLite consensus disorder prediction 1 53 - -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 699 851 - -
Acco09g1161 1094 Pfam E1-E2 ATPase 275 476 - -
Acco09g1161 1094 Gene3D - 178 374 - -
Acco09g1161 1094 Pfam Cation transporting ATPase, C-terminus 891 1065 IPR006068 -
Acco09g1161 1094 Gene3D - 508 706 IPR023299 GO:0000166
Acco09g1161 1094 SMART Cation_ATPase_N_a_2 157 228 IPR004014 -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 9 plasma membrane-type 352 522 - -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 255 374 - -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 508 706 - -
Acco09g1161 1094 SFLD p-type atpase 480 858 IPR044492 -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 57 113 - -
Acco09g1161 1094 MobiDBLite consensus disorder prediction 1 22 - -
Acco09g1161 1094 PRINTS Sodium/potassium-transporting ATPase signature 241 261 - -
Acco09g1161 1094 PRINTS Sodium/potassium-transporting ATPase signature 618 636 - -
Acco09g1161 1094 PRINTS Sodium/potassium-transporting ATPase signature 491 512 - -
Acco09g1161 1094 SUPERFAMILY Calcium ATPase, transduction domain A 276 371 IPR008250 -
Acco09g1161 1094 ProSitePatterns E1-E2 ATPases phosphorylation site. 500 506 IPR018303 -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 806 825 - -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 830 842 - -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 699 710 - -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 721 731 - -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 322 336 - -
Acco09g1161 1094 PRINTS P-type cation-transporting ATPase superfamily signature 498 512 - -
Acco09g1161 1094 CDD P-type_ATPase_Ca_PMCA-like 182 939 - -
Acco09g1161 1094 SUPERFAMILY HAD-like 496 911 IPR036412 -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 823 1070 - -
Acco09g1161 1094 Gene3D - 206 1060 - -
Acco09g1161 1094 Pfam Cation transporter/ATPase, N-terminus 157 223 IPR004014 -
Acco09g1161 1094 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 1068 IPR023298 -
Acco09g1161 1094 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 703 IPR023299 GO:0000166
Acco09g1161 1094 Pfam Ca2+-ATPase N terminal autoinhibitory domain 46 87 IPR024750 GO:0005516
Acco09g1161 1094 PANTHER CATION TRANSPORTING ATPASE 121 1068 - -
Acco09g1161 1094 SFLD Haloacid Dehalogenase 480 858 - -
Acco09g1161 1094 FunFam Calcium-transporting ATPase 206 263 - -
Acco09g1161 1094 NCBIfam calcium-translocating P-type ATPase, PMCA-type 140 1068 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1161 Acco-ChrAcco09 26052661 26073463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1161 10 1088 Primary Pumps ATPases AT3G21180 73.548 0.0 1595