Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1112 ATGTGGTCTCCAAACCCTAAAGCTTCAGGGATTAGAAAAGGAGGAGGAGGAAATGGTCTTGTGGCTGTTGCTATCGATAAGGATAAAGGAAGCCAACAAGCTCTCAAATGGGCGGCTGAAAGTCTCATCTCTAAAGGCCAAACTCTTATTCTGATCCATGTTTTGCACAAGTCTTCGCCTCCTAGTTCCAACGGAGGATTTCAATCAGTAATATATAACGTGGGCAATCTATCTGCATCACCACAAAGGCACCAACTTGATAAAACTACGAAGGATCTATTTCTTACCTTCCATTGCTTTTGTACTCGCAAAGATGTAGGTATAAAATGCCTTGATATTGTACTTGAAGACACTGATGTTGTGAAAGCAGTAATAGAATTTGCCTCTTACGCTGCGATTGAGAACTTGGTGCTTGGGGCACCTTCAAGGCATGGATTCATTAGATTTAAGTCATCAAGTATACCGAGCGGCATATCCAAAGGGGCACCAGATTTCTGCACCGTGTATGTCATATCTAAGGGGAAAATATCTTCTGTTCGAAATGCTTCTCGTCCAGCTCCTCATACCTCTCCTCTGCTTAGTAAAATGCAGAGTCTAGATAACCAAAATGAGCATCAACCTGAGGTGCCCTCCAGTGGAATTTCACATTTGCAAGACAAAACACCTACCAAACCTCACAGCTGGCAAGATGAATCCATTAGGTCAACATATAGAAGAGGAAGGGGAGGCTTAAGTGGAAGGGCATTTGCAGACCATGCTGATATAGAATCAGACATATCATTTATAAGCTCAGGCAGACCAAGCAGTGTTCGTCCATCCTCTGTGTTCTATGATTATATGGACGCTACCCCACGCATTTCAACTGGCTCAGGTCGTAGCTTTGCATCAACTCCTTTAGGCTTCAAGCCCATGGATCACACTTCGCCAGATGTATCATTTACACAAGATGAGATTGGAACATCATTTTCATATTCATCTCAGAACATGGAAGATGTAGGAACTGATATGAGGAGGTTGAAGATTGAGTTGAAGCAAACAATGGATATGTACAGTGTAGCATGCAGAGAAGCACTCACAGCACGACAAAAGTTAATGGAGTTGAGCGACTGGAGACGCGAGGAAGAGAAGAAGATAGAAGAGTCACGATTAGCCCAAGAAGCTGCACTGGCAATTGCGGAGAAAGAGAAAGCAAGGAGTAGGGCAGCCATGGAAACAGCTGAAGCAGCTAAGAAAATAGCTGCAGTGGAATCTCATAAAAGAGCAAGTGTTGAAATGAGAGCACTGAGAGAAGCAGAAGGAATCAGAAAACTATTGGATAACCTAACCCAAAGTGATGGAAGATATAGGAAATATAGTATTGAAGAGATTGAAGAAGCAACAGAATACTTCTCGGAGTCTAGGAAAATTGGAGAAGGAGGGTATGGCCCGGTCTTCAAGTGTTATCTAGATCATACACCAGCAGCCGTCAAGGTTCTTCGACCAGATGCTGCTCAAGGGAGAGAACAATTTCAGCAAGAGATTGATATACTTAGCTGCATACGCCATCCCAACATGGTACTTCTACTTGGAGCATGTCCAGAATATGGCGTACTAATTTATGAATATATGGCTAATGGAAGCCTAGAAGATTGTCTGTTCCGCAAGAAAAATCGCGACCGTGTTTTGCCATGGCAGTACAGGTTCAGAATCGCTGCAGAAATAGCCACAGGCTTACTGTTTCTACATCAAACCAAGCCTGAACCTTTAGTACATCGCGACTTAAAACCTGCCAACATTTTACTGGACCATAACTACGTAAGTAAAATAAGCGACGTTGGACTGGCTAGGTTGGTGCCTGCCGTTGCTGAGAATGTGACACAATGTTGGATGACTGCAACAGCGGGGACATTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGCTGGGAGTGAAGTCTGATGTATATTCTCTTGGGATTATGCTTCTACAGCTAGTAACAGGCAAGCCACCAATGGGGTTGGCACATTTTTTAGGCGAGGCTATTGATAATGGCACATTTGAGGACATGCTTGACCCATCTGTGCAAGATTGGCCAATTGAACAGGCCTTATGTTTCACAAAGCTTGCACTTAAATGTTCAGAACTTAGACGCAAAGATAGGCCAGACCTTGCCAAAGTAATATTACCAGAGCTCAATAAATTGAGAGAGTTTGCTGAAGAACACCCTAGTGGCAGCTTGTTAGGTGGCATTGGTAGTACTGGGCCCTCCCCAAACCACAGTCAAGCTTCCATACAACAGGATGTGTTAAGTGACCCACGGCTTGAGCATTCTGAGGGAAGCTCTAGAAGCCTATCGAGCCCATCATCGCACACAGAAGGATAG 2367 0.4381 MWSPNPKASGIRKGGGGNGLVAVAIDKDKGSQQALKWAAESLISKGQTLILIHVLHKSSPPSSNGGFQSVIYNVGNLSASPQRHQLDKTTKDLFLTFHCFCTRKDVGIKCLDIVLEDTDVVKAVIEFASYAAIENLVLGAPSRHGFIRFKSSSIPSGISKGAPDFCTVYVISKGKISSVRNASRPAPHTSPLLSKMQSLDNQNEHQPEVPSSGISHLQDKTPTKPHSWQDESIRSTYRRGRGGLSGRAFADHADIESDISFISSGRPSSVRPSSVFYDYMDATPRISTGSGRSFASTPLGFKPMDHTSPDVSFTQDEIGTSFSYSSQNMEDVGTDMRRLKIELKQTMDMYSVACREALTARQKLMELSDWRREEEKKIEESRLAQEAALAIAEKEKARSRAAMETAEAAKKIAAVESHKRASVEMRALREAEGIRKLLDNLTQSDGRYRKYSIEEIEEATEYFSESRKIGEGGYGPVFKCYLDHTPAAVKVLRPDAAQGREQFQQEIDILSCIRHPNMVLLLGACPEYGVLIYEYMANGSLEDCLFRKKNRDRVLPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKISDVGLARLVPAVAENVTQCWMTATAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLVTGKPPMGLAHFLGEAIDNGTFEDMLDPSVQDWPIEQALCFTKLALKCSELRRKDRPDLAKVILPELNKLREFAEEHPSGSLLGGIGSTGPSPNHSQASIQQDVLSDPRLEHSEGSSRSLSSPSSHTEG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1112 788 Pfam Protein kinase domain 464 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1112 788 PANTHER OS02G0152300 PROTEIN 21 769 - -
Acco09g1112 788 ProSiteProfiles Protein kinase domain profile. 463 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1112 788 Gene3D HUPs 20 178 IPR014729 -
Acco09g1112 788 MobiDBLite consensus disorder prediction 199 222 - -
Acco09g1112 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Acco09g1112 788 MobiDBLite consensus disorder prediction 223 237 - -
Acco09g1112 788 SMART serkin_6 463 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1112 788 MobiDBLite consensus disorder prediction 737 788 - -
Acco09g1112 788 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 435 535 - -
Acco09g1112 788 Coils Coil 389 409 - -
Acco09g1112 788 Gene3D Phosphorylase Kinase; domain 1 442 535 - -
Acco09g1112 788 MobiDBLite consensus disorder prediction 199 240 - -
Acco09g1112 788 MobiDBLite consensus disorder prediction 744 765 - -
Acco09g1112 788 CDD STK_N 20 174 - -
Acco09g1112 788 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 171 - -
Acco09g1112 788 SUPERFAMILY Protein kinase-like (PK-like) 446 722 IPR011009 -
Acco09g1112 788 FunFam Os07g0541700 protein 536 627 - -
Acco09g1112 788 MobiDBLite consensus disorder prediction 774 788 - -
Acco09g1112 788 Pfam Universal stress protein family 21 163 IPR006016 -
Acco09g1112 788 Gene3D Transferase(Phosphotransferase) domain 1 536 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1112 Acco-ChrAcco09 25387902 25396498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1112 1 759 Receptor kinase-like Gene Family AT1G78940 56.499 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco09g1112 Pkinase 2.3e-40 CL0016