Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1108 ATGGATTCCAAGAAGCCTAACAAGATCACAGATATCGTTCGGCTTCAACAAATCCTCAAGAAATGGAAGAAGGTGGCAAATAATGCTGCCAAGAACAACTCTGGTTCTGTTGCCACTTCTTCGTCATCTTCTGCAAGCAATAACAGTAACAGTACTAATGGTGGTGGAAGTAAAGGCATGAAGTTCTTGAAGAGAACTCTGTCTTTCACAGATATTTCCGGTTCAAATGAGACCGTGCCAAAAGGGTTTCTTGCTGTTTGTGTTGGAAAGGAGCTCAAGAGATTCACTATCCCAACAGAGTATTTGAGACACCAAGCTTTTGAGATGTTGCTGAGAGAAGCTGAAGAGGAGTTTGGTTTCCAACAGGAGGGAGTACTAAAGATTCCTTGCCAAGTATCAGTGTTTGAGAAAGTTTTGAAGGTTGTGCAAGGCAAAAAAGAAGCTTTCTTGTCCCAAGACAAGGACAAGATCATTACTTGTTATGTTTCAGACTGTGATGCTACTACATCATCTCATCAAGCTCAAATGTGTAGATGA 537 0.4115 MDSKKPNKITDIVRLQQILKKWKKVANNAAKNNSGSVATSSSSSASNNSNSTNGGGSKGMKFLKRTLSFTDISGSNETVPKGFLAVCVGKELKRFTIPTEYLRHQAFEMLLREAEEEFGFQQEGVLKIPCQVSVFEKVLKVVQGKKEAFLSQDKDKIITCYVSDCDATTSSHQAQMCR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1108 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 50 138 IPR003676 GO:0009733
Acco09g1108 178 MobiDBLite consensus disorder prediction 30 57 - -
Acco09g1108 178 Pfam Auxin responsive protein 21 141 IPR003676 GO:0009733
Acco09g1108 178 MobiDBLite consensus disorder prediction 30 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1108 Acco-ChrAcco09 25313699 25314235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1108 1 178 Calmodulin-binding Proteins AT2G24400 51.295 3.83e-59 181