Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1094 ATGATGTCTCCTTCTGTTCAAAATTTTGGTCCTCTTTTCCCAGAAATTCCTCTTCAAGAGCTATTTAGGGTTGTGAGGATTATATCGGAGAAAGAAGCTATAATAATAATGGATCCAGTAGCTGCACAGGGTCGTCCTCTTCCACCACCTTTTCACACCAGAGATCTTCATCTTCATCCCCATCACCAATTTCATCAGACCCACCACAATAACAATCACTCCGCCGCCGCCGACGTGGACGAGCAGGCCAGTAATGGCAGATTGAACCGCGGTCAGAAGCGAGATCATGAGAACACCGCCACTGAGGGGAAGGAATTGGGTTCTAATAACACAGCTCCTGGGGCCGGAGATGCTGCAGGTGGAGGTGGCGGTGGCGGTGGGGATAATAGTGCGAGAAGGCCTCGTGGCAGACCGGCCGGTTCGAAGAACAAGCCCAAGCCTCCGATCATCATAACGAGGGATAGCCCTAACGCGCTTAGGTCTCATGTGATGGAGATCGCTAACGGCGGAGATATCATGGACAGTGTCGCGAACTTCGCACGGCGGAGGCAGCGTGGGGTTTGCATTCTGAGTGGAAGTGGCACCGTCACTAATGTCACCCTCCGGCAACCAGCTTCGCCCGGTGCAGTTGTGACCTTACACGGAAGATTCGAGATTCTATCACTATCCGGCTCGTTCCTGCCGCCGCCGGCACCACCTGCCGCTTCGGGGATGGCCATATATCTGTCTGGCGGACAGGGTCAAGTAGTCGGAGGCACCGTGGTGGGGCCCTTGTTGGCGTCCGGGCCGGTGGTCATAATGGCTGCTTCGTTCGGAAATGCTGCGTACGAGAGACTGCCTTTAGAGGAAGAAGAGACGCCGCCCGTGGCGGCCGTGACTGGAAGCGGAGGGTTAGGCTCGCCGGGAATCGTTGGACAACAGCAACAATCACAGCCACAGCAGCAACAGCAGAATCAAATCGTGGGAGATCCTAACACTACATCCATGTTTCATGGAGTTCCTCAGAATCTTCTGAATTCTTGTCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCCACAACACCGTTCGTCCTCCATTTTAA 1083 0.542 MMSPSVQNFGPLFPEIPLQELFRVVRIISEKEAIIIMDPVAAQGRPLPPPFHTRDLHLHPHHQFHQTHHNNNHSAAADVDEQASNGRLNRGQKRDHENTATEGKELGSNNTAPGAGDAAGGGGGGGGDNSARRPRGRPAGSKNKPKPPIIITRDSPNALRSHVMEIANGGDIMDSVANFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGMAIYLSGGQGQVVGGTVVGPLLASGPVVIMAASFGNAAYERLPLEEEETPPVAAVTGSGGLGSPGIVGQQQQSQPQQQQQNQIVGDPNTTSMFHGVPQNLLNSCQLPAEGFWGGGHNTVRPPF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1094 360 MobiDBLite consensus disorder prediction 87 102 - -
Acco09g1094 360 MobiDBLite consensus disorder prediction 300 333 - -
Acco09g1094 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 160 272 IPR005175 -
Acco09g1094 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 157 287 - -
Acco09g1094 360 MobiDBLite consensus disorder prediction 285 333 - -
Acco09g1094 360 FunFam AT-hook motif nuclear-localized protein 159 286 - -
Acco09g1094 360 CDD DUF296 160 227 IPR005175 -
Acco09g1094 360 ProSiteProfiles PPC domain profile profile. 156 292 IPR005175 -
Acco09g1094 360 MobiDBLite consensus disorder prediction 84 157 - -
Acco09g1094 360 Gene3D - 159 288 - -
Acco09g1094 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 75 340 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1094 Acco-ChrAcco09 24915233 24916476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1094 37 360 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.078 1.08e-83 255