Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1087 ATGAGTACAAACTCGACCAGCACCATTACTGGTGGTGTTGGGGGTGGTGGTGGGAGCTGCGGCGGTGGAGGTAGTGGTGGCGGTGGCGGTGGGGGAGGGCCGTGCGGTGCGTGCAAGTTTCTGAGGAGGAAGTGCGTGCCAGGGTGTATCTTCGCGCCGTACTTCGACTCGGAGCAAGGAGCGACGCATTTCGCGGCGGTGCACAAGGTGTTCGGAGCGAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTCGAGGCTCAGGCACGGCTGAGAGATCCTGTTTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAATCTACAAGCAGAACTTTCATACTTGCAAGGTCACCTTGCAACATTAGAGTTGCCCCAACCGCCACCGCCACCTCCAATGCCGCAAGGCGCAGTACCAACACCGACAACTCTCTCAATCGGCAACGTCCCATCGGTCACACCCACCTCATCTCTCCCGGTGACATATGATTTGTCTTCTCTCTTTGATCCAATGGTTCAAACTTCTTGGGCCCTGCCACAACGGGGCATGGACCTAAGCCAATATGGGCCTACCGCCGGCTCGCCATCAGGCGGCGGCGGCGGCAGTGGAGGTGGCGATCTTCATGTCCTTGCAAGAGAACTGCTCAACAGACATGGGCCCCCTTCATCTTCAACACCCATGGCTTGCTCTAAAGCCTCCTCTTCGACATCTTTTTCCAAATGA 771 0.5681 MSTNSTSTITGGVGGGGGSCGGGGSGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVNLQAELSYLQGHLATLELPQPPPPPPMPQGAVPTPTTLSIGNVPSVTPTSSLPVTYDLSSLFDPMVQTSWALPQRGMDLSQYGPTAGSPSGGGGGSGGGDLHVLARELLNRHGPPSSSTPMACSKASSSTSFSK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1087 256 Pfam Lateral organ boundaries (LOB) domain 34 132 IPR004883 -
Acco09g1087 256 MobiDBLite consensus disorder prediction 202 256 - -
Acco09g1087 256 ProSiteProfiles LOB domain profile. 33 135 IPR004883 -
Acco09g1087 256 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 141 - -
Acco09g1087 256 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1087 Acco-ChrAcco09 24738147 24745019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1087 34 256 AS2 family AT2G45420 60.086 1.09e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco09g1087 LOB 1.3e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1087 09 24738147 24745019 Acco09g1087 09 24738147 24745019 ECH