Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1085 ATGGATAATTGTGGATCTAGTAAGATTAATGATAAGAATGGTGGTGATGAAGGTGGTCAGAGTCAGAGAGGGCCGTGTGGGGCCTGCAAGTTCCTGAGACGAAGGTGCGTGAAGGGGTGTGTATTTGCACCCTACTTTGACTCCGATCAAGGGACGGCTCAGTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGTAACGCCGCCAAGCTTCTGCTGCAAATCCCTCCTCACCACCGTCTCGACGCCGTCGTCACTCTCTCCTACGAGGCTCTCTCCAGGGCTCGTGATCCTGTTTATGGCTGCGTCGCCCACATCTTCGCCCTTCAACAACAGGTGATGAACTTGCAGGCGGAGTTAGCATATGTGCAAGCTCGTCTATCAACGTTGCAGCGTCTGCCGGTGATGGCGGCCGGAACTCTTCCTCAGCTTGAAATCTCTCCATCTTCTAACAATGACTTTCCCTTTGATCCAACTAATTCACTTCAGTTCTCAACTTTTCTCAACCCTTGTGATTTGCAACATGATTGGGATCTTCAAGCTTTAGCCAAAGATTTTGTATCAAGAGTGAAAGAGGAGAAGAAAATCTAG 588 0.5017 MDNCGSSKINDKNGGDEGGQSQRGPCGACKFLRRRCVKGCVFAPYFDSDQGTAQFAAVHKVFGASNAAKLLLQIPPHHRLDAVVTLSYEALSRARDPVYGCVAHIFALQQQVMNLQAELAYVQARLSTLQRLPVMAAGTLPQLEISPSSNNDFPFDPTNSLQFSTFLNPCDLQHDWDLQALAKDFVSRVKEEKKI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1085 195 Coils Coil 112 132 - -
Acco09g1085 195 ProSiteProfiles LOB domain profile. 24 126 IPR004883 -
Acco09g1085 195 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 136 - -
Acco09g1085 195 MobiDBLite consensus disorder prediction 1 17 - -
Acco09g1085 195 Pfam Lateral organ boundaries (LOB) domain 25 123 IPR004883 -
Acco09g1085 195 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1085 Acco-ChrAcco09 24678519 24683933 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1085 28 188 AS2 family AT2G45410 61.963 5.80e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco09g1085 LOB 9.3e-37 No_clan