Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1084 ATGGAAGCAAGAGAAGGAATCAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCACGTTGCACCGAGAACCGAAGCACCAAGCCAGACTCAAGTTCATGATGTATCAGCAGCGGTACCAGCAGCACCAAATGTTGGTGCCTCCCCAGGGAGTGTTGGATTGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGGTCTGTCGCTATGGCATTGTCACCTTTGCCAATTTCATCTTCTGCGCCACTTTCTAATGACTTCTCATCTGGGAAGCGAGGCAAATCAGCTGGAATGGAGTACAAGAAACATAAGAAAGTTGGATTGGAGCATTTGGGTGATTTGAATGCCTGCTCCCTTGGTACAAACTTCATGCCTCATATCATCACAGTCAATACTGGCGAGGATATTACAATGAAAGTTATTTCTTTTTCTCAACAAGGACCCCGGGCTATATGCATCCTCTCTGCTACCGGTGTGATTTCAAATGTTACACTTCGTCAACCTGATTCTTCTGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATACTGTCGCTGTCTGGATCATTCATGCCTACTGATAATCAAGGAACAAGAAGCAGGTCGGGTGGAATGAGTGTCTCTTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCAGCAAGACCCGAAACCGAAGAAGACCAAATCTGATTATGCCCCACCAGCTAGTGTTACCCCGCCAACTGTCCCTATTTCTTCTGCGCCACCCTCAACTAATGCTGAAAAAGAAGCCATGGGTGGCGGACATGTCCTGCAAAATTCTGGAAACCTGAATTCCAGCATGACGTCTCCCTCAACATTCCGACGAGAAAACTGGGTGAACATGCACTCTATGCCAGATTTGAGACAGTCGGCTACCGACATTAACATCTCCCTCCCAGATAGTTGA 1032 0.4816 MEAREGISSGVTVIGAEAPSAYHVAPRTEAPSQTQVHDVSAAVPAAPNVGASPGSVGLDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGKRGKSAGMEYKKHKKVGLEHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDPKPKKTKSDYAPPASVTPPTVPISSAPPSTNAEKEAMGGGHVLQNSGNLNSSMTSPSTFRRENWVNMHSMPDLRQSATDINISLPDS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1084 343 Gene3D - 136 265 - -
Acco09g1084 343 ProSiteProfiles PPC domain profile profile. 131 270 IPR005175 -
Acco09g1084 343 MobiDBLite consensus disorder prediction 299 313 - -
Acco09g1084 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Acco09g1084 343 CDD DUF296 136 249 IPR005175 -
Acco09g1084 343 MobiDBLite consensus disorder prediction 250 313 - -
Acco09g1084 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 311 IPR039605 GO:0003680
Acco09g1084 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 254 - -
Acco09g1084 343 FunFam AT-hook motif nuclear-localized protein 1-like 136 266 - -
Acco09g1084 343 MobiDBLite consensus disorder prediction 46 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1084 Acco-ChrAcco09 24648389 24652947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1084 6 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.468 4.41e-101 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1084 09 24648389 24652947 Acco09g1084 09 24648389 24652947 ECH