Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1065 ATGGCCACCGCCACCGCGTCCGCCGTCCTACTCCTCCTGCTCTTCTCGGCCTCCGCCATTTCCTCCGTCTTCAGTGGTGGCCGTGAAATGGAGCTGCTTCGGCTGGCTCACACCCAACTTGTTGAAGCTAGGACTTGGGTTGAGAGCCTTCATCATCATCAGCAGCAGAGTGGCGTTAACGTCGCAAGTTCAATGCTTTCACGGTCATCTTCACCAGCCACGGCGGCTGGCGCGGCGCTTGGAGACTGTGCTAAGCTGTATAAAGAGAGTGAGCAGAGGATGAATGAGTTGGTATCAAAGGCTGGTGATGATGGTGTAAGTTGGTGGGTGAGTAGTGTAATTAGTAACCATAGGACGTGTTTGGATGGGTTGAAAGAAAAAGGGTACGACATGGAAACTGAGGGGGGTTTGCATAAGAACTTGACTTTATCGCTTCAAGAGGCTCTTCACTTATTAGCGAAGAACAAACAGAGAGCCAAAGCAAAAACACCGCCAAAGGGAAACATTCCCAAATCATACGGTGGGCTATTGACGTCATGGAATCCGACCCAGTCAAGGGCACATTTCACGGTGGCTCAGGATGGTTCCGGCAGCCACAGAACGATCGGAGCAGCCATAGAAGCAGTGAGTTCATTGGGTCAAAATCGTCCCGAAAGAGTCATCATTCACGTCAAATCAGGAATCTACAACGAGAAGGTTGAGATCGGATACAGACTCAAGAACTTGATGCTCGTCGGAGACGGCATCGACAAGACCATCATCACCGGCGCCAGAAGTGTCGCCAGCGGTTCCTCCACCGTCAGCTCCGCCACACTCGATGTATCGGGCGATGGGTTTTGGGGAAGGGACATACAGATCGAGAACAGAGCAGGTCCACAGGATCATCAAGCGGTGGCGATCAAGGTGAGCTCAGATCGCTCCGTCTTCTACAGATGCAGCTTCAGAGGCTACCAAGACACACTCTACGCCCACTCCAATCGTCAATTCTACAGAGACTCCATAATTTCCGGCACCGTTGACTTCATATTCGGCGATGCCTCCGTCGTCTTCCAGAACTGCGACATCCTCCTCCGTAGGCCAATGTCCTACCAGTCCAATTTCATCACGGCACAGGGACGATCTGACCCAAACCAACCGACCGGGATCGTGATCCAAAACTGTAGGGTTAGGCCGGAGGGTTCCGCCGGAGCAAGAAATTACCTGGGAAGGCCATGGAAGAAGTATTCAAGAACGGTGTTCATGAAGAATGATCTGGATGGTTGTATTGATCCCAAAGGATGGGGTGAGTGGAGTGGTGGTTTTGCATTATTGACTCTGTATTATGCAGAGTATATGAACAATGGTGAAGGAGCTTCTACTCAGAATAGAGTGAATTGGCCTGGCTTTCATGTTCTGCGTTCTGCTTCTGAGGTTAGACTTTTCTCTGTGGATGAGTTTCTGCTCGGAGATCGGTGGATCCCGGCCACCGGCGTGCCCTTCTCCGCCGGTGTTTGA 1494 0.5167 MATATASAVLLLLLFSASAISSVFSGGREMELLRLAHTQLVEARTWVESLHHHQQQSGVNVASSMLSRSSSPATAAGAALGDCAKLYKESEQRMNELVSKAGDDGVSWWVSSVISNHRTCLDGLKEKGYDMETEGGLHKNLTLSLQEALHLLAKNKQRAKAKTPPKGNIPKSYGGLLTSWNPTQSRAHFTVAQDGSGSHRTIGAAIEAVSSLGQNRPERVIIHVKSGIYNEKVEIGYRLKNLMLVGDGIDKTIITGARSVASGSSTVSSATLDVSGDGFWGRDIQIENRAGPQDHQAVAIKVSSDRSVFYRCSFRGYQDTLYAHSNRQFYRDSIISGTVDFIFGDASVVFQNCDILLRRPMSYQSNFITAQGRSDPNQPTGIVIQNCRVRPEGSAGARNYLGRPWKKYSRTVFMKNDLDGCIDPKGWGEWSGGFALLTLYYAEYMNNGEGASTQNRVNWPGFHVLRSASEVRLFSVDEFLLGDRWIPATGVPFSAGV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1065 497 Gene3D - 183 497 IPR012334 -
Acco09g1065 497 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 154 IPR035513 -
Acco09g1065 497 PANTHER PECTINESTERASE 47 487 - -
Acco09g1065 497 Pfam Pectinesterase 189 483 IPR000070 GO:0030599|GO:0042545
Acco09g1065 497 Pfam Plant invertase/pectin methylesterase inhibitor 60 134 IPR006501 GO:0004857
Acco09g1065 497 SUPERFAMILY Pectin lyase-like 183 496 IPR011050 -
Acco09g1065 497 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 128 IPR035513 -
Acco09g1065 497 ProSitePatterns Pectinesterase signature 2. 335 344 IPR033131 -
Acco09g1065 497 FunFam Pectinesterase 182 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1065 Acco-ChrAcco09 24392996 24396803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1065 9 497 Carbohydrate Esterase AT3G60730 50.573 4.68e-178 508