Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1031 ATGAAGGTCGGCGTCTCCAGGTCTGTTCGCGGCGATCCCCTCTGTTTTCAGAATCTTAACCCGAGTAATGTTACAGGAAATAAGCTCACAGGTTCAATTCCCAAGGCTTTGAGGGAAAAGGCTAATTTGCAGCTGAGTTTGTCGAACAATCCAGGTCTTTGCCGGACAAATTCATGCAAAGAACCCAAATTTGTAATTCCAATTACTGCGTCACTTTCAGCTTTGGCTATCGTTATTGTCCTCATTTCTTTGGTGATCTGGAGATTCAGAAAGAAAAGAGTTTTGTCAACTGAACCTCCAAAGGTTGAAGGTCCAAGACGAAAGAATCAATCCTTTTCTTATTCTGAAGTTCTCCGTATCACAAACAATTTTGAAACTACTATTGGAGAAGGAAGGTTCGGGAAAATTTACCTGGGCACCTTAAAAGATGAGAAACAGGTTGCTGTTAGGTTACTTTCTATAACGTCAGGGCAAGGATATAAGGAATTTCAATCAGAGGCTCAACTCTTGACAGTCATTCATCATAGAAATCTGGTTTCACTTGTTGGTTTTTGTGATGAAACCAATGCCAAAGCATTGATCTATGAGTGTATGGATCTTGGAGACCTTGGCCGACTATTAACAGAGAAAAGCTCAAATGTTTTGAAGTGGAAAGAGAGACTTCAAGTTGCGGTGGATGCAGCAAATGGATTAGAATATCTTCATAATGGTTGTAAGACTCCTATAATCCATAGAAACTTGAAGCCATCCAACATTTTATTAAATAAGTCCATGGTAGCCAAGATTGCTGATTTTGGATTGTCTAGAGCATTTACAAATGAAACAGATTCTCATCTATCAACTCAACCAATTGGTACATCTGGTTACATTGATCCTGAATTCCAAAAGTCTGGAAGACTATATAAAGAAAGTGACATTTATAGTTTTGGGATGATTCTTCTTGAGCTAATCACAAGCCACCCTCCGATCAGACTAGAACATGGGAATATTTGCTATATTATTGACTGGGTTCGTTCAAAAATTGAATGTGGGGATATCCAAGGCATCGTTGATCCCCGTTTGGCAGGTGACTTTCTTGTGGCTTCTGCATGGAAAACTGTTGAGATAGCAATGTCATGCACACTGCTAGAGTGGAAAGAAAGGCCGGACATAAGCTCTGTGTTACATGAACTAAGTGAATGTTTAGATATGGAGATGGATCATGCTAAATCAAATGAAACACCAAGCTTTGAAATTAATCATGTTGATCAGTTTGATTCAACAATTACCCTCTCAGCGAGGTAG 1284 0.3941 MKVGVSRSVRGDPLCFQNLNPSNVTGNKLTGSIPKALREKANLQLSLSNNPGLCRTNSCKEPKFVIPITASLSALAIVIVLISLVIWRFRKKRVLSTEPPKVEGPRRKNQSFSYSEVLRITNNFETTIGEGRFGKIYLGTLKDEKQVAVRLLSITSGQGYKEFQSEAQLLTVIHHRNLVSLVGFCDETNAKALIYECMDLGDLGRLLTEKSSNVLKWKERLQVAVDAANGLEYLHNGCKTPIIHRNLKPSNILLNKSMVAKIADFGLSRAFTNETDSHLSTQPIGTSGYIDPEFQKSGRLYKESDIYSFGMILLELITSHPPIRLEHGNICYIIDWVRSKIECGDIQGIVDPRLAGDFLVASAWKTVEIAMSCTLLEWKERPDISSVLHELSECLDMEMDHAKSNETPSFEINHVDQFDSTITLSAR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1031 427 Gene3D Phosphorylase Kinase; domain 1 105 197 - -
Acco09g1031 427 Gene3D Transferase(Phosphotransferase) domain 1 198 418 - -
Acco09g1031 427 PANTHER OS07G0107800 PROTEIN-RELATED 17 399 - -
Acco09g1031 427 ProSiteProfiles Protein kinase domain profile. 122 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1031 427 FunFam Os07g0541700 protein 202 286 - -
Acco09g1031 427 FunFam receptor-like protein kinase FERONIA 91 197 - -
Acco09g1031 427 SUPERFAMILY Protein kinase-like (PK-like) 105 391 IPR011009 -
Acco09g1031 427 Pfam Protein tyrosine and serine/threonine kinase 124 321 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1031 Acco-ChrAcco09 23621212 23624786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1031 18 395 Receptor kinase-like Gene Family AT2G19230 46.015 3.32e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1031 PK_Tyr_Ser-Thr 2e-44 CL0016