Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1030 ATGAGGACGTTGTGTCATCGTCTAACTTCGTTTTCAACTCTTTGGCTGTATTCTCACGACTCCTTTAGATTTACTTGCATATCTGAAGAAGATGGTCTACCCAGTGGGAGTGGTGATGGAGTGACTATTGGGCGGAGTTGGCAGAGGTTGACGGTTGTTTGTTGGTTCAGTTTGGAGGTAGAGGACCAAGAGGCTCAGCTCTTAACAGTCATTCATCATAAAAACTTGGTTTCCCTTGTTGGGTTTTGTGATGAGGACGGCGTCAAAGCATTGATTTATGAATATTTGGATCTTGGAGACCTCAGCCAACTATTGTCAGAGAAAAACACCAAAATTTTGAAGTGGAATGAGAGACTTCAGGTTGCTGTGGATGCAGCAAAAGGATTGGAATATCTCCATAACGGTTGTGAGACTCCTATAATACACAGAGACTTGAAGCCATCCAACATTTTACTAAATAAATGCATGGTAGCCAAGATTGCTGATTTTGGATTGTCTAGAGCATTTAAAAATGAAAGAGATTCTCATATATCTACTCAACCAGCTGGTACACCTGGTTACGTTGATCCTGAGTAA 576 0.4132 MRTLCHRLTSFSTLWLYSHDSFRFTCISEEDGLPSGSGDGVTIGRSWQRLTVVCWFSLEVEDQEAQLLTVIHHKNLVSLVGFCDEDGVKALIYEYLDLGDLSQLLSEKNTKILKWNERLQVAVDAAKGLEYLHNGCETPIIHRDLKPSNILLNKCMVAKIADFGLSRAFKNERDSHISTQPAGTPGYVDPE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1030 191 Gene3D Phosphorylase Kinase; domain 1 56 97 - -
Acco09g1030 191 FunFam Os07g0541700 protein 99 184 - -
Acco09g1030 191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Acco09g1030 191 Pfam Protein tyrosine and serine/threonine kinase 63 180 IPR001245 GO:0004672|GO:0006468
Acco09g1030 191 SMART serkin_6 29 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1030 191 PANTHER OS07G0107800 PROTEIN-RELATED 63 191 - -
Acco09g1030 191 Gene3D Transferase(Phosphotransferase) domain 1 98 191 - -
Acco09g1030 191 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1030 191 SUPERFAMILY Protein kinase-like (PK-like) 35 191 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1030 Acco-ChrAcco09 23572005 23575220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1030 64 191 Receptor kinase-like Gene Family AT2G19230 60.938 5.94e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1030 PK_Tyr_Ser-Thr 1.2e-27 CL0016