Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1028 ATGTCTGCAGAGAAAAACTCAAATGTATTAAAGTGGAAGGAGAGACTTCGCATTGCTATAGATGCAGCAATAGGCGTGGAATATCTTCATAATGGGTGCAAGACTCCCATAATTCACAGAGACTTAAAACCATCCAATATTTTACTAAACAAATCCATGGTAGCCAAGATCGCTGATTTTGGACTATCAAGAGCATTTACAAGTGAAGGAGATTCTCATCTATCAACTCAACCAGCGGGCACACCTGGCTTTATTGATCCTGAATTTCAAAGATCTGGAAAGCTAAATAAAAGAAGTGACATGTATAGTTTTGGGATGATTCTTCTTCAACTAATCACAGGCCATCCTCCGATAAGAAGAGAACGTGAGAGTATTTGTTTTATAATTGATTGGATCCGTCCCAATATTGAATGTGGGGATATCCAAAGCATCATTGATCAAAGGTTGAAAGGTGAATTCCAAGTGAGTTCAGCATGGAAAGCTGTTGAGATAGCAATGTCATGCCTTGCACTACCGTCCATCCAAAGGCCAGACGTTAGATATGTGTTGAATGAACTAAAAGAATGTTTGGCTATGGAGATAGATCATGCCAGCTCAAATGGTTCACAAGGCCATTCAATCAATCTTTCTGGGCAGCTTGATTCAATCACTTCCCTCTCAGCTAGGTAG 669 0.3991 MSAEKNSNVLKWKERLRIAIDAAIGVEYLHNGCKTPIIHRDLKPSNILLNKSMVAKIADFGLSRAFTSEGDSHLSTQPAGTPGFIDPEFQRSGKLNKRSDMYSFGMILLQLITGHPPIRRERESICFIIDWIRPNIECGDIQSIIDQRLKGEFQVSSAWKAVEIAMSCLALPSIQRPDVRYVLNELKECLAMEIDHASSNGSQGHSINLSGQLDSITSLSAR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1028 222 SMART serkin_6 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1028 222 Pfam Protein kinase domain 13 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1028 222 SUPERFAMILY Protein kinase-like (PK-like) 8 186 IPR011009 -
Acco09g1028 222 Gene3D Transferase(Phosphotransferase) domain 1 2 208 - -
Acco09g1028 222 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1028 222 PANTHER OS07G0107800 PROTEIN-RELATED 8 194 - -
Acco09g1028 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Acco09g1028 222 FunFam Os07g0541700 protein 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1028 Acco-ChrAcco09 23266383 23267246 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1028 1 207 Receptor kinase-like Gene Family AT1G51890 46.860 2.42e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1028 Pkinase 2.9e-26 CL0016