Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1027 ATGAAATTAACTGGACGGATAGCTACATCATTTGGCCGTTTGGAAAAATTGGAGTCCCTTAATGTTTCAGGAAACATGCTTACAGGTTCGATTCCCAAAGCTTTGAGGGAAAAGGCTAATTTACAGCTAAGTGTGGCCAACAATCCAGGTCTTTGCCTGACAAATTCATGCAAACAACATAAGTTTGCAATTCCACTTGTTGCATCAGTTTCAGCTCTGATCATTATTATTGTCCTCTTTTCTTTGGTGTTCTGGAGATTAATTAGAAAGAAGACAGTTTTGTCTACTGAATCTCCAAAGATGACCGTTCTAAAAGAAAAAAGTCAAGCTTTTTCTTACTTAGAGGTTATCCGCATAACAAACAATTTTGAAATTCCTATTGGAAAAGGTGGATTCGGGGAAGTGTACCAGGGCACGTTAGAAGATGACACAAAGGTTGCTGTTAAGTTACTTTCTCAATCTTCAAGGCAGGGGTACAAGGAATTTCAATCCGAGGCTCAGCTCTTAACAGTTATTCATCATAGAAACTTGGTTTCACTTGTCGGGTTTTGTAATGAAAACGACGTTAAAGCATTGATCTATGAATATATGGATCTTGGAGACCTCAGCGGACTATTGTCAGGTTTGTCTTAA 633 0.3839 MKLTGRIATSFGRLEKLESLNVSGNMLTGSIPKALREKANLQLSVANNPGLCLTNSCKQHKFAIPLVASVSALIIIIVLFSLVFWRLIRKKTVLSTESPKMTVLKEKSQAFSYLEVIRITNNFEIPIGKGGFGEVYQGTLEDDTKVAVKLLSQSSRQGYKEFQSEAQLLTVIHHRNLVSLVGFCNENDVKALIYEYMDLGDLSGLLSGLS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1027 210 Gene3D Phosphorylase Kinase; domain 1 102 196 - -
Acco09g1027 210 SUPERFAMILY Protein kinase-like (PK-like) 97 209 IPR011009 -
Acco09g1027 210 Coils Coil 210 210 - -
Acco09g1027 210 SUPERFAMILY L domain-like 2 60 - -
Acco09g1027 210 Pfam Protein tyrosine and serine/threonine kinase 126 206 IPR001245 GO:0004672|GO:0006468
Acco09g1027 210 PANTHER OS07G0107800 PROTEIN-RELATED 2 203 - -
Acco09g1027 210 Gene3D Ribonuclease Inhibitor 1 62 IPR032675 -
Acco09g1027 210 FunFam Leucine-rich repeat receptor-like protein kinase 99 196 - -
Acco09g1027 210 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Acco09g1027 210 ProSiteProfiles Protein kinase domain profile. 121 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1027 Acco-ChrAcco09 23258177 23259634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1027 3 210 Receptor kinase-like Gene Family AT1G07560 43.868 2.50e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1027 PK_Tyr_Ser-Thr 2.3e-17 CL0016