Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1025 ATGTTTCCTCTTCCCCTTACTATATTTGATTTGGATAACTCTGCAAGTGCAAGAATTGACTTGGGCTCTGGGCTCCAACCCCCCTATTGGACCAGGTTCAAAGACGATGTATATGATCGCTTGTGGTGGAACAATGATAATCCTAGTTGGGAAGTCTTACAAACAAGTGTAGAGACAAAGGCGGAGGACTCTGTTTATGAACTGCCATGGGAAGTATTACGCACTGCACAACGACCCCCTAATAATTCCAGTCTCTTAACTATACATTTAGTATTTGGGGATATGTCCAACACATACTATGCGTTTCTTCACTTTGCTGAAATTGAAAAGCTTTCTCGTGGCCAGAAGAGGATAATCAATGTCACTTTTGATGATGAAAATTCCCTCTCTCAGCAACTCACTCTTGAATACTTGAAGCCTATCACCCTAATCTCCAACATCACTAAAGGCTTCACCATCAAAGCAGCAACTGAGTCAGAAGCTCCTCCTATCCTAAATGCCTTTGAAATTTATAAAGTCATCCAGCAACCGAATTTCCCTACAGCTGAACAAGATGTTAAAGCTATCAAGGAAATACAGCATATCTATGGGGTCTCCAAAATCAGTTGGCAAGGTGACCCATGTGTTCCTTCTCACTTGGCTTGGGATGGTTTGAATTGCAGCTATGAGAATAATATAAGAATCATTTCATTGAACTTGAGTTCAAGCAAACTCACTGGAGTAATTGCCCCATCGTTTGCTAGTTTGGAAAAATTGGAGTCCTTGGATTTGTCAAACAATGAACTGACTGGACCACTACCAGAATTTCTTGCAACACTTCCTAATTTGAAATTCATTAATGTTACAGGAAATAAGCTCACTGGTTCAATTCCCAAGGCTTTGAGGGAAAAGGCCAATTTGGAGATAAGTATGGGCAACAATCCAAGTGTATATTGTCTAGCAAATTCGTGCAAAGAACACAAGAAGTTCGAGATTCCACTGATTGCATCACTTTCGACTTTGGCCATCGTCACTATCCTCATATCTTTGGTGATCTGGAGACTTAAAATGAAAACAGTTTTGTCCGTCGAATCCCAGAAGAAGAAAGTTCTAAAACCAAAGAATCAAGCTTTTTCCTACTCAGAGATTCTCCGTATCACGAACAATTTCGAAACTACAATTGGACAAGGAGGGTTTGGGAAAGTTTACCTGGGAACTTTAGAAGATGATACGAAGGTTGCTGTGAAGTTACTTTCCCCATCTTCAAAACAAGGGTATAAGGAATTTCAATCAGAGGCTCAACTTTTAACCGTCATTCATCATAGAAACTTGGTTGCACTTGTTGGGTTTTGCGATGAAAACGATGTCAAAGCATTGATTTATGAATATATGGACCTTGGAGACCTCGGTGGATTATTGTCAGACAAAAACCACAATGTTTTAAAGTGGAGCGATAGACTTCAAGTTGCTGTTGATGCAGCTAAAGGATTGGAATATCTTCATAATGGTTGTAAGACTCCTATAATCCATAGAGACTTGAAGCCATCCAACATTTTATTAAATAAGTTCATGGTAGCCAAAATTGCGGACTTTGGATTGTCTAGAGCATTCACAAGTGAAAGAGATTCTCATCTTTCCACTCAGCCAGCTGGTACACCTGGTTATATTGATCCCGAATTTCAAAGATCTGGAAAGCTAGACAAAAGAAGTGATATCTATAGTTTTGGGATGATTCTTCTTCAACTAATCACAGGCCATCCCCCGATAAGAAGACAATTCGAGAATGCTTATTTTATAATTGATTGGATCCGTCCAAAAATTGAGTGTGGGGATATCCAAAGCATTGTTGATCAAAGGTTGAATGGTGAATTTCAAGTTAGTTCAGCATGGAAAGCTGTTGAGACTGCAATGTCATGCATCGAACCACAGCCCATCCAAAGGCCAGACATTAGTTATATGTTGAATGAACTGAAAGAATGTTTGGCTATGGAGATGGATCTTGCCAATTCAAATGGTTTACAAAGCCACCGAATTAATCATCATTCTGGGCAGCTTGATTCAATCACTACCCTCTCAGCTAGGTAG 2064 0.3973 MFPLPLTIFDLDNSASARIDLGSGLQPPYWTRFKDDVYDRLWWNNDNPSWEVLQTSVETKAEDSVYELPWEVLRTAQRPPNNSSLLTIHLVFGDMSNTYYAFLHFAEIEKLSRGQKRIINVTFDDENSLSQQLTLEYLKPITLISNITKGFTIKAATESEAPPILNAFEIYKVIQQPNFPTAEQDVKAIKEIQHIYGVSKISWQGDPCVPSHLAWDGLNCSYENNIRIISLNLSSSKLTGVIAPSFASLEKLESLDLSNNELTGPLPEFLATLPNLKFINVTGNKLTGSIPKALREKANLEISMGNNPSVYCLANSCKEHKKFEIPLIASLSTLAIVTILISLVIWRLKMKTVLSVESQKKKVLKPKNQAFSYSEILRITNNFETTIGQGGFGKVYLGTLEDDTKVAVKLLSPSSKQGYKEFQSEAQLLTVIHHRNLVALVGFCDENDVKALIYEYMDLGDLGGLLSDKNHNVLKWSDRLQVAVDAAKGLEYLHNGCKTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFTSERDSHLSTQPAGTPGYIDPEFQRSGKLDKRSDIYSFGMILLQLITGHPPIRRQFENAYFIIDWIRPKIECGDIQSIVDQRLNGEFQVSSAWKAVETAMSCIEPQPIQRPDISYMLNELKECLAMEMDLANSNGLQSHRINHHSGQLDSITTLSAR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1025 687 PANTHER OS07G0107800 PROTEIN-RELATED 16 657 - -
Acco09g1025 687 CDD STKc_IRAK 387 652 - -
Acco09g1025 687 Gene3D Ribonuclease Inhibitor 188 310 IPR032675 -
Acco09g1025 687 Pfam Leucine rich repeat 230 286 IPR001611 GO:0005515
Acco09g1025 687 SUPERFAMILY Protein kinase-like (PK-like) 364 650 IPR011009 -
Acco09g1025 687 FunFam Lectin-domain containing receptor kinase A4.3 457 664 - -
Acco09g1025 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Acco09g1025 687 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Acco09g1025 687 SUPERFAMILY L domain-like 210 334 - -
Acco09g1025 687 Gene3D Phosphorylase Kinase; domain 1 353 456 - -
Acco09g1025 687 FunFam Leucine-rich repeat receptor-like kinase 184 312 - -
Acco09g1025 687 FunFam Leucine-rich repeat receptor-like protein kinase 356 456 - -
Acco09g1025 687 SMART serkin_6 381 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1025 687 ProSiteProfiles Protein kinase domain profile. 381 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1025 687 Pfam Protein tyrosine and serine/threonine kinase 383 650 IPR001245 GO:0004672|GO:0006468
Acco09g1025 687 Gene3D Transferase(Phosphotransferase) domain 1 457 672 - -
Acco09g1025 687 Pfam Malectin-like domain 17 173 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1025 Acco-ChrAcco09 23063054 23074482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1025 32 657 Receptor kinase-like Gene Family AT1G51830 42.337 1.76e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1025 PK_Tyr_Ser-Thr 3.8e-47 CL0016