Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1020 ATGGACCTTGGAGACCTCGATGGCTTGTTGTCAGAGAAAACCCAAAATGTTTTGAAGTACAGCCAGAGACTTCAAGTTGCTATTGATGCAACGAAAGGATTGGAATATCTTCATAATGGTTCTGGTACACCTGGTTATATTGATCCTGAATTTCAAAAGTCTAGAATCACAAATAAAAAAAGTGACATTTATAGCTTTGGGATGATTCTTCTTCAACTAATCACAGGCTGTCCTCCAATAAGAAGAGAATTTGGAAATATTTGTTATATAAGTGATTGGGTTCGTTCAAAAGTTGAATGTGGGGACATTCATGGAATTGTTGATCCAAGGTTGGAAGGTGAGTTCCGTGTTAATTCTGCATGGAAAATTGTTGAGATAGCAATGTCATGCATTTTACTAGATTCCAAAGAAAGGCCAGACATAGTCTTGGTGTTACAAGAACTAAATGAATGTTTATATTTGGAGATGGATCATGCCAAATCAAATAGCATGTCAAGCTATCCAGGCAATCATAGTGGACTGTTTAATTCAATGAACATCCCCTCAGCTAGGTAG 555 0.3712 MDLGDLDGLLSEKTQNVLKYSQRLQVAIDATKGLEYLHNGSGTPGYIDPEFQKSRITNKKSDIYSFGMILLQLITGCPPIRREFGNICYISDWVRSKVECGDIHGIVDPRLEGEFRVNSAWKIVEIAMSCILLDSKERPDIVLVLQELNECLYLEMDHAKSNSMSSYPGNHSGLFNSMNIPSAR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1020 184 PANTHER OS07G0107800 PROTEIN-RELATED 3 158 - -
Acco09g1020 184 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Acco09g1020 184 Gene3D Transferase(Phosphotransferase) domain 1 39 167 - -
Acco09g1020 184 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1020 Acco-ChrAcco09 22831386 22833026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1020 1 167 Receptor kinase-like Gene Family AT1G51890 34.112 6.71e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1020 None None None