Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1018 ATGCACATTAGAACTGACGATATATATGATCGCTTGTGGTGGAACGATGATAATCCCGCTTGGGATGTCTTACAAACAAGTGTAGAAGCAAAGGCGGAGGACTCCGTTTATGGACTGCCATGGGAAGTATTACGCACTGCACAACGACCCCCTAATAATTCCAATCTCTTAACTACAAATTGGCGTTTTGGGGATGTATCCAGTGAATATTATGCATTTCTTCACTTTGTTGAAATTGAAAAGCTTCCTCGTGGCCAGAAGAGGATAATCAATGTCACTTTTGATGATGAAAATTCCCTCTCTCAGCAACTTACTCTTGAATACTTGAAGCCTATTACCCTAATCTCCAATATCACTAAAGACTTCACCATCAAAGCAGCAACTGATTCAGATGCTCCTCCTATCCTAAATGCCTTGGAAATTTATAAAGTCATCCAGCAACCAAATTCCCCTACATCTGAACAAGATGTTAAAGTTATCAAGGAAATACAACATATATATGGGGTATCCAAAATTAGTTGGCAAGGTGACCCATGTGTTCCTTCTCACTTGGCTTGGGATGGTTTGAATTGCAGCTATAAGAACAATATAAGAATTATTTCATTGAACTTGAGCTCAAGCAAACTTACTGGAGTAATAGCTCCATCGTTTGCTAGTTTGGAAAAATTGGAGTCCTTGGATTTGTCAAACAATGAACTCACTGGACCACTACCAGAATTTCTTGCAACTCTTTCTAATTTGAAATTCATTAATGTTACTGGAAATAAGCTCACGGGTTCAATTCCCAAGGCTTTGAGGGAAAAGGCCAATTTGGAGATAAGTATGGGCAACAATCCAAGTCTATATTGTCAGGCAAATTCGTGCAAAGAACCCATGAAGTTTGAGATTCCACTGATTGCATCACTTTCAACTTTGGCCATCGTCACTATCCTCGTATCTTTGGTGATCTGGAGATTTAAAATGAAAAAAGTTTTGTCCGCCGAATCTCATCAGAAGAAGAAATTTCTAAAACCAAAGAATCAAGCTTTTTCCTACTCAGAGATTCTCCGTATCACGAACAATTTCGAAACTACAATTGGACAAGGAGGGTTTGGGAAAGTTTACCTGGGAACTTTAGAAGATGATACGAAGGTTGCTGTGAAGTTACTTTCCCCATCTTCAAAACAAGGGTATAAGGAATTTCAATCAGAGGCTCAACTTTTAACAGTCATTCATCATAGAAACTTGGTTGCACTTGTTGGGTTTTGCGATGAAAACGATGTCAAAGCATTGATTTATGAATATATGGACCTTGGAGACCTCGGTGGATTATTGTCAGACAAAAACCACAATGTTTTAAAGTGGAGCGATAGACTTCAAGTTGCTGTTGATGTAGCTAAAGGATTGGAATATCTTCATAATGGTTGTAAGACTCCTATAATCCATAGAGACTTGAAGCCATCCAACATTTTATTAAATAAGTTTATGGTAGCCAAAATTGCGGACTTTGGATTGTCTAGAGCATTCACAAGTGAAAGAGATTCTCATCTTTCCACTCAGCCAGCTGGTACACTTGGTTATATTGATCCCGAATTTCAAAGATCTGGAAAGCTAGACAAAAGAAGTGATATCTATAGTTTTGGGATGATTCTTCTTCAACTAATCACAGGCCATCCCCCGATAAGAAGACAATTCGAGAATGCTTATTTTATAATTGATTGGATCCGTCCAAAAATTGAGTGTGGGGATATCCAAAGCATTGTTGATCAAAGGTTGAATGGTGAATTTCAAGTTAGTTCAACATGGAAAGCTGTTGAGACTGCAATGTCATGCATCGAACCACAGCCCATCCAAAGGCCAGACATTAGTTATATGTTGAATGAACTGAAAGAATGTTTGGCTATGGAGATGGATCTTGCCAATTCAAATGGCTTACAAAGCCACCGAATTAATCATCATTCTGGGCAGCTTGATTCAATCACTACCCTCTCAGCTAGGTAG 1980 0.3869 MHIRTDDIYDRLWWNDDNPAWDVLQTSVEAKAEDSVYGLPWEVLRTAQRPPNNSNLLTTNWRFGDVSSEYYAFLHFVEIEKLPRGQKRIINVTFDDENSLSQQLTLEYLKPITLISNITKDFTIKAATDSDAPPILNALEIYKVIQQPNSPTSEQDVKVIKEIQHIYGVSKISWQGDPCVPSHLAWDGLNCSYKNNIRIISLNLSSSKLTGVIAPSFASLEKLESLDLSNNELTGPLPEFLATLSNLKFINVTGNKLTGSIPKALREKANLEISMGNNPSLYCQANSCKEPMKFEIPLIASLSTLAIVTILVSLVIWRFKMKKVLSAESHQKKKFLKPKNQAFSYSEILRITNNFETTIGQGGFGKVYLGTLEDDTKVAVKLLSPSSKQGYKEFQSEAQLLTVIHHRNLVALVGFCDENDVKALIYEYMDLGDLGGLLSDKNHNVLKWSDRLQVAVDVAKGLEYLHNGCKTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFTSERDSHLSTQPAGTLGYIDPEFQRSGKLDKRSDIYSFGMILLQLITGHPPIRRQFENAYFIIDWIRPKIECGDIQSIVDQRLNGEFQVSSTWKAVETAMSCIEPQPIQRPDISYMLNELKECLAMEMDLANSNGLQSHRINHHSGQLDSITTLSAR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1018 659 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Acco09g1018 659 Pfam Protein tyrosine and serine/threonine kinase 355 622 IPR001245 GO:0004672|GO:0006468
Acco09g1018 659 Gene3D Ribonuclease Inhibitor 159 282 IPR032675 -
Acco09g1018 659 FunFam Leucine-rich repeat receptor-like protein kinase 326 428 - -
Acco09g1018 659 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1018 659 SUPERFAMILY L domain-like 181 273 - -
Acco09g1018 659 Gene3D Transferase(Phosphotransferase) domain 1 429 644 - -
Acco09g1018 659 FunFam Leucine-rich repeat receptor-like kinase 155 284 - -
Acco09g1018 659 Pfam Leucine rich repeat 201 257 IPR001611 GO:0005515
Acco09g1018 659 FunFam Lectin-domain containing receptor kinase A4.3 429 636 - -
Acco09g1018 659 Pfam Malectin-like domain 5 144 IPR024788 -
Acco09g1018 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Acco09g1018 659 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1018 659 SUPERFAMILY Protein kinase-like (PK-like) 336 622 IPR011009 -
Acco09g1018 659 PANTHER OS07G0107800 PROTEIN-RELATED 5 629 - -
Acco09g1018 659 Gene3D Phosphorylase Kinase; domain 1 324 428 - -
Acco09g1018 659 CDD STKc_IRAK 359 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1018 Acco-ChrAcco09 22730766 22734834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1018 6 629 Receptor kinase-like Gene Family AT1G07560 42.476 1.18e-170 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1018 PK_Tyr_Ser-Thr 2.2e-48 CL0016