Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1004 ATGTCGGCCTCATCATCAATTACTTCTTCCTTTTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGTGACACTGTTCTCGCGGTTAGTGTTCCTTGCACCAGCTTGTTCAAGACTGTTACTGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTTAATATGCGTGGCCTTCTTCTTCCGTCTACCAATCAGCTTCACCTCGGTCACACATTCTTCCCTCCTCAGAATGTCCTGGAGGATATTCGAAATGCACCATCTTCAAACATACAGATGATGGGCCATCATCATCAGCTTCCATACCCAAATGACTCAGTTATGATCAGCACCATGCGAGGGGGAGGAGCAGGAGGAGGAGGAGGACTCGAGGAAATCCCTAAACCTCCACCGCCACCGGTTAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCGCACATACACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCCAATGTGCGCCAGGAAGGAGAAGCCGTGCTTATGAAAGAAGGGCATTTGGGAACCACAAACGTTGGTATATCACCATTTTAA 699 0.4921 MSASSSITSSFSPDHHLSPSDQLCYVHCHFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPSTNQLHLGHTFFPPQNVLEDIRNAPSSNIQMMGHHHQLPYPNDSVMISTMRGGGAGGGGGLEEIPKPPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEAVLMKEGHLGTTNVGISPF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1004 232 MobiDBLite consensus disorder prediction 132 146 - -
Acco09g1004 232 FunFam Axial regulator YABBY 141 213 - -
Acco09g1004 232 PANTHER PROTEIN YABBY 6-RELATED 5 208 IPR006780 GO:0007275
Acco09g1004 232 Pfam YABBY protein 19 196 IPR006780 GO:0007275
Acco09g1004 232 SUPERFAMILY HMG-box 137 190 IPR036910 -
Acco09g1004 232 Gene3D High mobility group box domain 138 192 IPR036910 -
Acco09g1004 232 CDD HMG-box_SF 150 186 - -
Acco09g1004 232 MobiDBLite consensus disorder prediction 122 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1004 Acco-ChrAcco09 22114388 22125159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1004 30 230 C2C2-YABBY Transcription Factor Family AT4G00180 60.465 1.55e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco09g1004 YABBY 5.1e-71 CL0114