Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0987 ATGATTCATCATAGAAACTTAGTTGCGTTTGTTGGGTTTTGCGATGAAAATGATGTCAAAGCATTGATTTATGAATATATGGAACTTGGAGACCTCGGCGGATTATTGTTAGAGAAAAACCAAAATGTTTTAAAGTGGAGCGAGAGACTTCAAGTTGCTATTGATGCAGCTAAAGCATTCACAAATGAAAGAGATTCTCATCTGTCAACTCAGCCAGCTGGTACACCTGGTTATATTGATCCTGAATTTCAAAGATCTGGAAAGCTAGATAAAAGAAGTGATATCTATAGTTTTGGGATGATTCTTCTTCAACTAATCACAGGCCATCCCCCAATTAGAAGACAACTTGATGATGCTTATTTTATAACTGACTGGATCTACCCAAAAATTGAGTGTGGTGATATATATGGCATTGTTGATCAAAGGTTGAATGGTGAATTCCAAGTTAGTTCAGCATGGAAAGTTGTTGGGACAACAATGTCATGCATTGAACTACAGCCCATCCAAAGGCCTGACATTAGTTATTTGTTGAATGAACTAAAAGAATGTTTGGATATGGAGATAGATCATGCCAATCCAAATGGTTCACAAAGCCTTCCAATCAATCATCCTTCTGGGCATTTTGATTCAATCACTTCCCTCTCACCTAGGTAG 654 0.3746 MIHHRNLVAFVGFCDENDVKALIYEYMELGDLGGLLLEKNQNVLKWSERLQVAIDAAKAFTNERDSHLSTQPAGTPGYIDPEFQRSGKLDKRSDIYSFGMILLQLITGHPPIRRQLDDAYFITDWIYPKIECGDIYGIVDQRLNGEFQVSSAWKVVGTTMSCIELQPIQRPDISYLLNELKECLDMEIDHANPNGSQSLPINHPSGHFDSITSLSPR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0987 217 SUPERFAMILY Protein kinase-like (PK-like) 2 194 IPR011009 -
Acco09g0987 217 Pfam Protein kinase domain 56 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0987 217 Gene3D Transferase(Phosphotransferase) domain 1 60 194 - -
Acco09g0987 217 Gene3D Transferase(Phosphotransferase) domain 1 1 59 - -
Acco09g0987 217 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0987 217 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0987 217 PANTHER OS07G0107800 PROTEIN-RELATED 2 184 - -
Acco09g0987 217 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0987 Acco-ChrAcco09 21719100 21720479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0987 2 187 Receptor kinase-like Gene Family AT2G28970 37.004 1.85e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g0987 Pkinase 6e-08 CL0016