Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0979 ATGAATTTGTTTCCCAAAATCTTTCTCCGCCGCATTTCTACCACCTCCACAACCGCCACAAGGAAGCTCCTGAAATCCTCAAAAATTCCTAAAAGGTACCAAAAACTCGCTGTTCATCAAGCCCAAAAAGTCCTCACCGATTACCTCCACGAAACTCGATGCTTACCTTTTGTATTTGCAGACCAGATTGGCAAAAACTCCCTCATTTCCCTTGTTAATCTCATTGTAAAGGTGGATTTTTCGGCTTCCGCTTTCTCGAGAAATTTCGAGAAATACCTAAGGTACCACCCCCTCAATGAGTTCGAATTTTTCTTTGAAAGCATAGGCATAGACTATAATAATGGCCCTTCTGGGTTGTTGCCTGTGAACAAGGTATTCCTTTCTGAAGATGGGTCAATTCTGGATGCAGCTTGTGCGCTTTCAGGTTTTGGGTTTCCGTGGGATAAATTGGGTAAGTTGTATGAGGAATGTAGTTCCATTTTCAGGAGAAGTCCTGAAGAATTGAAATCTAAACTTTGTGAGTTTAAGAAGTACGGGTTTGGTAATGTTGAAGTGGTTGGTATATGCCTAGCTTTCCCCAATGTCTTTGGTGAGGAAGATGAAATTGATGGTGAAATTGATGGTCTGTTTACTGATCTGAAGTCGGTATTTTTAGATTTTGAATTGGCAAGATCTGTAGAAGAAAACATAGATTGTTGGCATGAAGTATGTAGAAAAATTCGAGTGTTCTATAATTTAAATGGTGAGAAGGGAAAGTTAGGGGAGCTCATGGGAAGGGCAAAAGCCATTTTTATTGAATATGGAGAAGATGAGTTGATTCAAAAGGCAGAGTATTTCTGTAGATTTGGTGTCAAAAAAGAGGAAGTAGCACATTTACTTTTAAAAGCCCCAGAGTTATTGAGTCTTGATTTGCAGATTCCTTTGATTTCTGTGTCAAAGCTATTGAAACACTTTGGCTTGAGCCCTAAAATCCTGGAGGATGTTAGTAAAAAATATGATCATGTATTGGGGACAAACAAGATGGATAATCTCCCAAATGTAATGAGGGCTTTGGATTTACATGAGTGGTTCTTCAACAAAATGAAGGATGGAAATCATAACTTGTTATTAAGTTATCTTGCAAGCCATCCTAATGAAGACCAGAATGAAGAATACCAAGCTGGTTTAGAGAAAATTTGTGCTTCAAGATCCAAGAAACATAAAATGAGGAAATTGAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGTTTTAACTATAGGTATTGCAGCTCGCTTGCATGGCAATAGGTGGGAGTTACAGAAAAGGTCTGAAGTCCTTCTACATTTAGGGTTTGAATTCTCAGATCTCTGTATCATGGTGAAAAGAGCACCTGACATTCTGAACCAGAAAACTCAAGTTATAGATGAGAAGGTGAAATTCTTCTGTCAGGAACTGGGAATCCCTTTAAAGTGTCTGACCCCTATGGCTGCAGTTTTGACTTATAATCTAGAGGACCGTATTAGGCCCAGGCACAGATTCGTTATGTGGCTTAAAGAAAAGGGTCTGCTTGTAAAAAAGTATTCCATTGGAACTGTGATTTCTTGCAGCCGCAACCGTTTTGTAGATTTAGCTTATAAAATTCACCCTGCTGCCCCAAAACATTGGTTTGAGCAATTCTATATACCTCCAAACACTCATCAGCCTTATAACCATTAG 1698 0.3905 MNLFPKIFLRRISTTSTTATRKLLKSSKIPKRYQKLAVHQAQKVLTDYLHETRCLPFVFADQIGKNSLISLVNLIVKVDFSASAFSRNFEKYLRYHPLNEFEFFFESIGIDYNNGPSGLLPVNKVFLSEDGSILDAACALSGFGFPWDKLGKLYEECSSIFRRSPEELKSKLCEFKKYGFGNVEVVGICLAFPNVFGEEDEIDGEIDGLFTDLKSVFLDFELARSVEENIDCWHEVCRKIRVFYNLNGEKGKLGELMGRAKAIFIEYGEDELIQKAEYFCRFGVKKEEVAHLLLKAPELLSLDLQIPLISVSKLLKHFGLSPKILEDVSKKYDHVLGTNKMDNLPNVMRALDLHEWFFNKMKDGNHNLLLSYLASHPNEDQNEEYQAGLEKICASRSKKHKMRKLNFLHGLGFGENVLTIGIAARLHGNRWELQKRSEVLLHLGFEFSDLCIMVKRAPDILNQKTQVIDEKVKFFCQELGIPLKCLTPMAAVLTYNLEDRIRPRHRFVMWLKEKGLLVKKYSIGTVISCSRNRFVDLAYKIHPAAPKHWFEQFYIPPNTHQPYNH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0979 565 SMART mt_12 255 285 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 SMART mt_12 451 482 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 SMART mt_12 483 517 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 Pfam mTERF 429 534 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 Pfam mTERF 143 349 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 Gene3D Transcription termination factor 3, mitochondrial 222 553 IPR038538 -
Acco09g0979 565 PANTHER CGI-12 PROTEIN-RELATED 155 536 IPR003690 GO:0003690|GO:0006355
Acco09g0979 565 Gene3D Transcription termination factor 3, mitochondrial 67 215 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0979 Acco-ChrAcco09 21548125 21549822 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco09g0979 mTERF 4.2e-10 No_clan