Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0954 ATGGACTTTGAAGGGAACGTGTTCGCTAATAGAGAGCAAAACGGTGGTGGAAATAATAATAACAGTACCCACTTTTCTTGGGATTTATGGGAACCGCCTTCTTCTAGCAATTCTACCCTCATCAACACTTTCTACGCCGCCGCTACCGACACGGCGGATACCTCGGATGCTGTCGCTGCCACCACTCAGGCCGGCCTGGCCAACGCGCTCATGTTTCTTCCTCAGGCTAGTGGTGGTAGTTGTAGCACTGTGGCTGATCGTGACCACGACGGCGGCGGCAGCGGCGTTGACTACGGTGGACACCACCAGCATCGGCAGCGGCTGCAACAGCAGGAGGCGCTCTACTCTGGCGATGGGGCCCACGTGCATCTAGACCCACATCTCATGTGTTTGAAGCTGGGGAAGAGGCATTATTTTGAGGACGCTAATGCTCCTCTTGGCGGAGGCGGTGGTTCGTTTGCCTTGGCGGGAAAGAGAGGGAGAGGGTTTTACAGAGGAAGTGCGAAGACGGCGGCGGCGGCGACGGTGCCGAGGTGTCAGGTGGAGGGATGCCACGTGGCGCTGTTGAACGCGAAGGAGTATCACAGGAGACACAAAGTTTGTGAGATGCATTCCAAGGCAGCGAAGGTTGTGGTGTTAGGGTTGGAGCAGAGATTTTGTCAACAGTGTAGCAGGTTTCATGTGGTATCTGAATTCGATGATTCCAAGAGGAGTTGCCGTAGGAGATTGGCTGGCCACAACGAACGAAGAAGAAAGAGCTTCCATGATTCTGTTCCTAGGAATTCCTCATCTTCTCAAGAAAATAAGTTACTAGTGGGAGGGTTTCCATACTTATCATCACCTCCACCACCATCATCTGTATGTGCTCTCTCTCTTCTGTCATCGTCCAAGAGTGCCGACCATCATTCGTGGCTTTCCCCGGCCGATCTCTCGGCGAGATGCAGTGCTGCCCTTCGAGAACTTATAGCTGAGAACCGAGCAACCGCCATGGCTAAACAAATCATTTTGGAAAGAGACTGGCACTACTCACACCACCACCACCAAGAAGAAGATGAAGATGATGACCATAATAAGGAGATTCCTCTTATATCTAATTTCAATTTCTCCCAACAACACCACCAGATGTTTCCCTAG 1134 0.5185 MDFEGNVFANREQNGGGNNNNSTHFSWDLWEPPSSSNSTLINTFYAAATDTADTSDAVAATTQAGLANALMFLPQASGGSCSTVADRDHDGGGSGVDYGGHHQHRQRLQQQEALYSGDGAHVHLDPHLMCLKLGKRHYFEDANAPLGGGGGSFALAGKRGRGFYRGSAKTAAAATVPRCQVEGCHVALLNAKEYHRRHKVCEMHSKAAKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSFHDSVPRNSSSSQENKLLVGGFPYLSSPPPPSSVCALSLLSSSKSADHHSWLSPADLSARCSAALRELIAENRATAMAKQIILERDWHYSHHHHQEEDEDDDHNKEIPLISNFNFSQQHHQMFP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0954 377 MobiDBLite consensus disorder prediction 243 267 - -
Acco09g0954 377 FunFam Squamosa promoter-binding-like protein 14 170 240 - -
Acco09g0954 377 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 71 307 IPR044817 GO:0003677
Acco09g0954 377 Pfam SBP domain 179 252 IPR004333 GO:0003677
Acco09g0954 377 SUPERFAMILY SBT domain 177 257 IPR036893 GO:0003677|GO:0005634
Acco09g0954 377 Gene3D - 170 240 IPR036893 GO:0003677|GO:0005634
Acco09g0954 377 MobiDBLite consensus disorder prediction 1 29 - -
Acco09g0954 377 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Acco09g0954 377 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0954 Acco-ChrAcco09 20655842 20658093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0954 129 252 SBP-box Gene Family AT1G27370 51.562 2.04e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco09g0954 SBP 4.9e-31 No_clan