Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0944 ATGAAAATCCCACAGCCTCGATCAAGAGCACCCCTTCGTTCAAATTCCAATTCTACTGCTCCTGATGTTCCCATGTTAGATTACGAAGTTGCGGAGCTAACATGGGAAAATGGACAGCTCTCAATGCATGGTTTGGGTTTGCCCAAAGTACCAGAAAAACCCATCGACGCCGCCGCCGCCGGTAGGTCAACAACCCCTTATTCCAAGTACACACGGGATAAGCCTCGTGGGAGTGGCACCTTGGAGTCCGTTGTCAACCAAGCCACTAGATATCCTCACCGTGGGAAATCCATATTCGACGTCGGCGCCGCGGCTGACAGGGATGACTTAGTGCCGTTGTTTGATCCACTAAGAGCGGCGGTTTCCGCAGTAATGGCTGCCACTGCCTCGGCTGCGTCGAATACCATGACCATGGACGGCATGGTGCCTCGTTCAATCCGTACGGAGGAGCAGCAAACCACGCAGGTTATGGACTCAGTGACCTGTGGTGGCACAGTTGGCAGGTGCATGTTGGGCTATTCAACATGTGTGGGGTCTTTTAGTGGGCCCGCCAATCAAGAGGACGAGGCGGTGTTGGCAGCGAAACGCGCGAGGGTGGCGCGTGTGCCAGTGGCCGCGGAGTGGAGTGGCCGAGATCCAAGTGTGAGTGGAAGCGCCACGTGTGGAAGAGAAAGCCAGCGCGTGACGTGGGACACATGGGAGAACGAATCAGGGATGGGCTTCATTTCCACCTCCATGGGCTCGCCGGAAAACACTAGCTCCGCGAGGCAGTGCACCAAAACTACTGCCGCGGACGACCACGATTCTGTTTGCCATAGCAAAAAAGAGACAGCTGATGAGGAGGACGAAAAGAAAGGAAGAGGGAAATCCTCAGTGGCCACTAAAAAGAGTAGGGCTGCTGCTATACACAACCAATCTGAAAGGAAAAGGAGAGATAAGATAAACCAGAGGATAAAGACATTGCAAAAGCTGGTCCCAAATTCCAGTAAGAGTCCTAATAATTAA 1005 0.5323 MKIPQPRSRAPLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPKVPEKPIDAAAAGRSTTPYSKYTRDKPRGSGTLESVVNQATRYPHRGKSIFDVGAAADRDDLVPLFDPLRAAVSAVMAATASAASNTMTMDGMVPRSIRTEEQQTTQVMDSVTCGGTVGRCMLGYSTCVGSFSGPANQEDEAVLAAKRARVARVPVAAEWSGRDPSVSGSATCGRESQRVTWDTWENESGMGFISTSMGSPENTSSARQCTKTTAADDHDSVCHSKKETADEEDEKKGRGKSSVATKKSRAAAIHNQSERKRRDKINQRIKTLQKLVPNSSKSPNN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0944 334 MobiDBLite consensus disorder prediction 261 290 - -
Acco09g0944 334 MobiDBLite consensus disorder prediction 301 315 - -
Acco09g0944 334 Coils Coil 304 324 - -
Acco09g0944 334 MobiDBLite consensus disorder prediction 1 22 - -
Acco09g0944 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 296 330 IPR036638 GO:0046983
Acco09g0944 334 MobiDBLite consensus disorder prediction 59 79 - -
Acco09g0944 334 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 30 331 IPR031066 -
Acco09g0944 334 Gene3D - 293 334 IPR036638 GO:0046983
Acco09g0944 334 MobiDBLite consensus disorder prediction 238 315 - -
Acco09g0944 334 MobiDBLite consensus disorder prediction 238 260 - -
Acco09g0944 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 334 IPR011598 GO:0046983
Acco09g0944 334 Pfam Helix-loop-helix DNA-binding domain 303 330 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0944 Acco-ChrAcco09 20369766 20371799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0944 18 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 46.497 3.97e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g0944 HLH 8.9e-08 No_clan