LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco09g0925	ATGAGCCTCTCTCACAACAACAATAACAACAACTCCTCTAACAGCCAGGCTTGCGCTGCTTGTAAATTCAGACGTAGAAAGTGTGCTCCTGATTGCATTCTTTCACCTTATTTCCCTCACGATCGCCAATGTCGATTTCTCAACGCTCATAAATTGTTCGGTGTTCGAAACATCATTAGAGTCATCGAAAACCTCGACCCACGAGACAAGGACCAAGCCATGCAAAGCATCATTTTTCACTCCGACATGCGAGCTATTGACCCCGTCGGAGGTTGTTACAAATACATTAAGCAGCTTGAAGCTCAGATTCAATACCATACCACTCAACTCAACCTTGTTCTTCAGCACCTCGCTGTTTTTCGTCATCATCATGAACCTATGAACATCATCAATTCCAATCATTTGAATCTATGTAACCCTAATATTGCACCATCATCATCGCATCATCAAGATCCGTATCTCATGGTTCAGGAACATCACAACAATGATGTCGTGCGTGTTCCTAATTTGCAGGACGACAAGGATTTTAATTCTTGGGCCTTGCTGGATTCCATGTCTTTGTCTATGCACAACAAGAACGACTGCCATGATCATGATCAGAGTGGTTTTGTCAGTGGGGATGGATTGTACAATGATCAGAAATTTTCATCTTCTATGCTTGACATTCATAATTGTGATGAGAGGAATGAGATAAGTTTTGAACCTGAAGAATTACTAGAACACAGTGATGAAACGATCTTGCTCAAGATAGAAGATGGAGTGGTAAATGAAGAGATTAATCGCATTGAACAAGTTCAAGATCATGATCTAAAAGGTGCTGCCACCTTGTTTACGCTCACAAATTGTACAAGCTGA	855	0.4117	MSLSHNNNNNNSSNSQACAACKFRRRKCAPDCILSPYFPHDRQCRFLNAHKLFGVRNIIRVIENLDPRDKDQAMQSIIFHSDMRAIDPVGGCYKYIKQLEAQIQYHTTQLNLVLQHLAVFRHHHEPMNIINSNHLNLCNPNIAPSSSHHQDPYLMVQEHHNNDVVRVPNLQDDKDFNSWALLDSMSLSMHNKNDCHDHDQSGFVSGDGLYNDQKFSSSMLDIHNCDERNEISFEPEELLEHSDETILLKIEDGVVNEEINRIEQVQDHDLKGAATLFTLTNCTS	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco09g0925	284	ProSiteProfiles	LOB domain profile.	16	117	IPR004883	-
	Acco09g0925	284	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	14	151	-	-
	Acco09g0925	284	Pfam	Lateral organ boundaries (LOB) domain	17	112	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco09g0925	Acco-ChrAcco09	18963208	18974111	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco09g0925	16	161	AS2 family	AT3G13850	51.007	7.44e-47	156

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Acco09g0925		LOB	1.1e-32	No_clan