Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0919 ATGGAGACCCCTCCGCAATCGTTTTCCTACCATGTCTCTGGTAAACCTAATTATCCTGTAGTCTTTGAAAATCTTCCTATCCAAAGCCATCACCACACTGGGACACTTAATTTTATAGTCAGACTCTGTGTTCGTTTCCAACATAGTTCTGGTTCTCATGAGATAGTTGGGGGCACAAGAGTTCTTTCTCCACCAGTTACCTCTCTTTACATATCATGTGCAGAATTCTTTCGAACTAGTTCGAGTTTACTTAGAATGAATCTATCCCACCCTTTAATCCATGCTCAAAACCTTGATGCTCTGATACCAAGAATCATATCCACTACTCAAGGATGGTTTAATGATAGTTGTCCTTCACATTCTGTCCTCGAAGGTGGTGGAATCATTATAATCCCTTTAGCTATTGATGTTACCGTCACATTTACTAGGAGTGGTGGAAATGCTTTGACACCAATAACCATTTCCACAGTTCAAGAATGGTTTAATGAAAATCGTCCTTCCTCACCTTTGGTTCTTGAAGCTATTGATGTTATAGTTAGATTTGCTATGAGTATGGATTTTGTGAATTTGATGGAAGCAATTAGTATGGAGGAGTCCATGCAAGAGATTAACCTGGTTCCTGCCTCTGAAGAAGCCATCCAATCGCTCAACACAATCAAGCTTGTAGAAAATACTAGCAATGAGCAATGTTGTGTTTGTCTTGAAGATTTTGGTGAAGTTGAGATCTCAACAATGCCATGTCATCATAATTTTCACAAAAGTTGTATTATTAAGTGGCTAAAAACAAGTCATCTATGTCCTTTATGTCGGTATCCAATGCCTGCAGCCAATGATGCTTAG 840 0.3905 METPPQSFSYHVSGKPNYPVVFENLPIQSHHHTGTLNFIVRLCVRFQHSSGSHEIVGGTRVLSPPVTSLYISCAEFFRTSSSLLRMNLSHPLIHAQNLDALIPRIISTTQGWFNDSCPSHSVLEGGGIIIIPLAIDVTVTFTRSGGNALTPITISTVQEWFNENRPSSPLVLEAIDVIVRFAMSMDFVNLMEAISMEESMQEINLVPASEEAIQSLNTIKLVENTSNEQCCVCLEDFGEVEISTMPCHHNFHKSCIIKWLKTSHLCPLCRYPMPAANDA 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0919 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 276 IPR013083 -
Acco09g0919 279 SMART ring_2 230 269 IPR001841 -
Acco09g0919 279 ProSiteProfiles Zinc finger RING-type profile. 230 270 IPR001841 -
Acco09g0919 279 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 176 274 - -
Acco09g0919 279 Pfam Ring finger domain 229 270 IPR001841 -
Acco09g0919 279 SUPERFAMILY RING/U-box 222 274 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco09g0919 Acco-ChrAcco09 18746097 18748463 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0919 195 277 C3H Transcription Factor Family AT1G18760 37.647 2.49e-14 68.9