Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0917 ATGGGGACCCCTCCGCAATCGTATTCGTACCATGTCTCTGGTAAACCTAATTATCCTGAAGTCTTTGAAAATCTTCCTATCCAAAACCATCACCACACTGGGACACTTAATTTTATAGTCAGACTATGTGTTCGTTTCCAGCATAGTTCTGGTTCTCATGAGATAGTTGGGGGCACAAGGGTTCTTTCTCCACCAGTTACCTCTCTTTACATATCATGTGCAGAATTCTTTCGAATTGGTTCGAGTTTACTTAGAATGAATCTATCCCACCCTTTAATTCATGCTCAAAACCTTGATGCTGCGATACCAAGAATCATATCCACTGCTCAAGGATGGTTTAATGATAATTGTCCTTCACCTTCTGTCCTCGAAGGTGGCGGAATTATTATAATCCCTTTAGCTATTGATGTTACTGTCACATTTACTAGGAGTATGGATTTTGAGAATTTGTTCGGAACAAGGATTAACATGCTTCCCACCTCTGAAAAAGCCATCCAATCACTCAACACAATCAGCGGTCAAGAAAATTTTTGTACTGAACCATGTTGTATTTGTCTTGAAGATTTTGGTGATGCTGAGATTTCAACAATGCCATGCCATCATAATTTTCACAAAAATTGTATTGTAAAGTGGCTAAAAACAAGTCATTTATGTCCTTTATGTCGACACCCAATGCCCACCAAGTCTTAG 690 0.3913 MGTPPQSYSYHVSGKPNYPEVFENLPIQNHHHTGTLNFIVRLCVRFQHSSGSHEIVGGTRVLSPPVTSLYISCAEFFRIGSSLLRMNLSHPLIHAQNLDAAIPRIISTAQGWFNDNCPSPSVLEGGGIIIIPLAIDVTVTFTRSMDFENLFGTRINMLPTSEKAIQSLNTISGQENFCTEPCCICLEDFGDAEISTMPCHHNFHKNCIVKWLKTSHLCPLCRHPMPTKS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0917 229 ProSiteProfiles Zinc finger RING-type profile. 182 222 IPR001841 -
Acco09g0917 229 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 226 - -
Acco09g0917 229 SUPERFAMILY RING/U-box 181 228 - -
Acco09g0917 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 228 IPR013083 -
Acco09g0917 229 SMART ring_2 182 221 IPR001841 -
Acco09g0917 229 Pfam Ring finger domain 182 222 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0917 Acco-ChrAcco09 18616194 18616883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0917 155 226 C3H Transcription Factor Family AT1G18760 39.189 5.99e-13 63.9