Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0915 ATGGGGACCCCTCCGCAATCGTATTCGTACCATGTCTCTGGTAAACCTAATTATCCTGAAGTCTTTGAAAATCTTCCTATCCAAAACCATCACCACACTGGGACACTTAATTTTATAGTCAGACTATGTGTTCGTTTCCAGCATAGTTCTGGTTCTCATGAGATAGTTGGGGGCACAAGGGTTCTTTCTCCACCAGTTACCTCTCTTTACATATCATGTGCAGAATTCTTTGGAACTGGTTCGAGTTTACTTAGAATGAATCTATCCCACCCTTTAATCCATGCTCAAAACCTTGATGCTCTGATACCAAGAATCATATCCACTGCTCAAGGATGGTTTAATGATAATTGTCCTTCACCTTCTGTCCTCGAAGGTGGTGGAATCATTATAATTCCTTTAGCTATTGATGTTACTGTCACATTTACTAGGAGTATGGATTTTGAGAATTTGTTTGGAGCAAGGATTAACATGCTTCCCGCCTCTGAAAAAGCCATCCAATCACTCAACACAATCAGCGGTCAAGAAAATTTTTGTACTGAACCATGTATTTGTCTTGAAGATTTTGGTGATGCTGAGATTTCAACAATGCCATGTCATCATAATTTTCACAAAAATTGTATTGTAAAGTGGCTAAAAACAAGTCATTTATGTCCTTTATGTCGACACCCAATGCCCACCAAGTCTTAG 687 0.3916 MGTPPQSYSYHVSGKPNYPEVFENLPIQNHHHTGTLNFIVRLCVRFQHSSGSHEIVGGTRVLSPPVTSLYISCAEFFGTGSSLLRMNLSHPLIHAQNLDALIPRIISTAQGWFNDNCPSPSVLEGGGIIIIPLAIDVTVTFTRSMDFENLFGARINMLPASEKAIQSLNTISGQENFCTEPCICLEDFGDAEISTMPCHHNFHKNCIVKWLKTSHLCPLCRHPMPTKS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0915 228 Pfam Ring finger domain 182 221 IPR001841 -
Acco09g0915 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 227 IPR013083 -
Acco09g0915 228 ProSiteProfiles Zinc finger RING-type profile. 183 221 IPR001841 -
Acco09g0915 228 SMART ring_2 181 220 IPR001841 -
Acco09g0915 228 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 125 225 - -
Acco09g0915 228 SUPERFAMILY RING/U-box 182 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0915 Acco-ChrAcco09 18597878 18598564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0915 168 225 C3H Transcription Factor Family AT1G74620 45.000 1.35e-12 63.5