Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0908 ATGGAAGGAGAGAGAGGCGTTCCGAATAATTATGAACTTCAGGTTTCCTTCACAAACCCTCATCATCCTCATCATCAAGCAGCCATCCACGAAATGGGTTTTGTTCAATTCGAAGAGAATCAAGTCCTCAGCTTCTTAGCTCCTTCTGCTCAGTCTCAATCTTCTTCCTGCGGCGGCAGCAGTGCGGCGGCTGCCGCCCCTTCCTCAGCACCAGGCACAAACGGAGGAGGAGGAGCCGCTGGCGCAGTCGCTACTTCGGCTGGGTTTAGCCATAATGACCTTGTTAATACCAGATCAACTCCATGGAACACCGAGCAGGTGGGAACTCTGGATCCCAAGGCTGTCAATGATGAAAACTGCACTGGAAATGCTAGTGACGGCAACAATACATGGTGGAGGAACACAGCATCAGATAAAAGTAAAGTGAAGGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTGGATGTTCTAGATGATGGCTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAAAACAGCCTCCATCCAAGAAGCTACTACCGTTGCACCCATATCAACTGCAGAGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGTATGGTGATAACAACTTATGAAGGAAGGCACAACCACTCTCCTTGCGACGACTCAAATTCATCTGAACATGAATGCTTCACCTCTTTCTAA 717 0.4756 MEGERGVPNNYELQVSFTNPHHPHHQAAIHEMGFVQFEENQVLSFLAPSAQSQSSSCGGSSAAAAAPSSAPGTNGGGGAAGAVATSAGFSHNDLVNTRSTPWNTEQVGTLDPKAVNDENCTGNASDGNNTWWRNTASDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHINCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0908 238 Gene3D WRKY domain 150 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0908 238 SUPERFAMILY WRKY DNA-binding domain 156 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0908 238 FunFam WRKY transcription factor 57 150 224 - -
Acco09g0908 238 MobiDBLite consensus disorder prediction 54 80 - -
Acco09g0908 238 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0908 238 MobiDBLite consensus disorder prediction 92 129 - -
Acco09g0908 238 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 225 IPR044810 GO:0003700
Acco09g0908 238 MobiDBLite consensus disorder prediction 54 68 - -
Acco09g0908 238 ProSiteProfiles WRKY domain profile. 159 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0908 238 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0908 Acco-ChrAcco09 18386175 18393779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0908 103 238 WRKY Transcription Factor Family AT2G44745 71.329 2.69e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g0908 WRKY 4.2e-24 CL0274