Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0903 ATGACAATCATTATTTCGATTGCTCTGCTTTCTTTCATCTCTCATTTTCTCATTCTCACTACTGCACAGCAAGGCTTCATATATCATTTGTGTTACAACAGTGTGGGTAACTACACAAACACAAGTGCCTATGGAACAAACCTTAAAACCCTTCTTTCTAATCTCACCTCCGACACAAAAATTGACTATGGCTATTACAGTTCCTCTGAAGGCCAAAACCCTAACAGAGTTAACGCTCTTGGACTGTGTAGGGCAGATGTCAAGCCAGATTCTTGTCGTACTTGCCTCAACAATGCCTCAATCCTTCTACGAAATCTTTGTCCAAATCAGAAGGAAGCGTATGGATATAACGACGGATGCATTTTACGATACGCCAATCGCTCCATGTTTGGGATAAATCAAGAGCCAGATTTTTCAATCTACATGTGTAACCTTAATAATGCAACAGATAATAAGTACAGTGAAGTGCTTGATGGTCTAATGCGAAGGCTTAGAAGCAAAGCTGCCACTGGTGATAGTCGCCGGAAGTTTGCTGCTAACTTAGCGACGACTTTGTTTCAGACTATATATGGTCTTGTTCAGTGCATGCCTGATTTGTCTGAGCAAGATTGTGACGATTGCTTGGAGAAGGCGATATCCAGCATTCCCTCGCTCTGTAACAACAGGATTGGCGGGAGGATTATCAAACTGAGTTGCAATATTAGATATGAGAATTATCGCTTCTATGATACTGCAATTGTGGATTCATTATTATCTTCACCTCCTCCTGCTTCACCACCATCCAACACATCTTCCTCACAAGGTACTGCTGATTCACCAAAAGCTATATCTTCCCCGGAAGGGAATCACAGCACATCAAGAACTGTCATTATCGTTGCTGCATCCATTGGAGCTTTTATCGCAATTCTTATTTTGGTCTGCATTTATTTTGTGGTCCGGAAATCGAAGAGAACCATTGAAATTGATCAACCTGAAGCAAAGGATGATGATAAAATTATACCAATCGAGTCACTACAATTCAATTTTAACACCATAAGACTTGCCACAGATAGCTTTTCTGTGGCAAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATACAAGGGCAGGCTTCCAAATGGTCAGGACATTGCTGTCAAAAGGTTGTCCATGGATTCTGGGCAAGGAGATTTAGAATTTAAAAATGAAGTGCTCTTGGTGGCTAAGCTCCAACATCGCAATTTAGTGAGATTACTTGGCTTCTCCTTAGAAAAACGTGAAAGATTGTTGGTCTACGAGTTTCTTTCCAACAGAAGTCTTGATTACTTATTGTTTGACTCAAGTCAATGTGTTCATTTGAATTGGGTAATACGCTACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTATCTTCATGAAGATTCAAGATTGCGTATTATTCATCGGGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCTAAAATATCAGATTTTGGCATGGCAAGACTATTTGTTGTGGACCAAACTCAAAGCAATACAAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCTATCAAATCAGATGTTTTTAGTTTTGGCATATTGGTTCTAGAGATCTTAAGTGGCAAAAAGAACAACAGTGTATACGATGAAGAGAACGCCCATGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACGGCCTTCAATTTAGTAGATCCAATTGTAAACAATGGTTCAAGAAATGAAATAATAAGATGCATCCACATTGGGTTATTATGTGTTCAAGAAAATGTGGCTGACAGGCCAACCATGGCTCAAGTTGTACTTATGCTCAATAGCTACTCTTCCTCTCTCCCTTTACCTTCGAAGCCTCCACTTTTCATGAATACCAATGATTCATCTGAGTTACAGATGAGAGAGTACAGCTCAGAGGCAACAACAAGATCAAGCGAACGGGCAAGTAACTCTATTCAAGAATCAGTAAACGAGGCCTCAATTACTGAACTATATCCGCGTTAG 2052 0.3981 MTIIISIALLSFISHFLILTTAQQGFIYHLCYNSVGNYTNTSAYGTNLKTLLSNLTSDTKIDYGYYSSSEGQNPNRVNALGLCRADVKPDSCRTCLNNASILLRNLCPNQKEAYGYNDGCILRYANRSMFGINQEPDFSIYMCNLNNATDNKYSEVLDGLMRRLRSKAATGDSRRKFAANLATTLFQTIYGLVQCMPDLSEQDCDDCLEKAISSIPSLCNNRIGGRIIKLSCNIRYENYRFYDTAIVDSLLSSPPPASPPSNTSSSQGTADSPKAISSPEGNHSTSRTVIIVAASIGAFIAILILVCIYFVVRKSKRTIEIDQPEAKDDDKIIPIESLQFNFNTIRLATDSFSVANKLGQGGFGSVYKGRLPNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLEKRERLLVYEFLSNRSLDYLLFDSSQCVHLNWVIRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEILSGKKNNSVYDEENAHDLLSFAWKNWREGTAFNLVDPIVNNGSRNEIIRCIHIGLLCVQENVADRPTMAQVVLMLNSYSSSLPLPSKPPLFMNTNDSSELQMREYSSEATTRSSERASNSIQESVNEASITELYPR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0903 683 SMART serkin_6 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0903 683 FunFam Cysteine-rich receptor-like protein kinase 10 313 427 - -
Acco09g0903 683 Gene3D Transferase(Phosphotransferase) domain 1 428 630 - -
Acco09g0903 683 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Acco09g0903 683 FunFam cysteine-rich receptor-like protein kinase 10 428 629 - -
Acco09g0903 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 681 - -
Acco09g0903 683 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Acco09g0903 683 CDD STKc_IRAK 358 623 - -
Acco09g0903 683 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Acco09g0903 683 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0903 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Acco09g0903 683 SUPERFAMILY Protein kinase-like (PK-like) 337 656 IPR011009 -
Acco09g0903 683 MobiDBLite consensus disorder prediction 253 282 - -
Acco09g0903 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Acco09g0903 683 MobiDBLite consensus disorder prediction 648 683 - -
Acco09g0903 683 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Acco09g0903 683 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Acco09g0903 683 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Acco09g0903 683 MobiDBLite consensus disorder prediction 262 282 - -
Acco09g0903 683 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Acco09g0903 683 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0903 683 Gene3D - 23 129 IPR038408 -
Acco09g0903 683 Gene3D - 136 241 IPR038408 -
Acco09g0903 683 MobiDBLite consensus disorder prediction 648 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0903 Acco-ChrAcco09 18135529 18142640 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0903 36 683 Receptor kinase-like Gene Family AT4G21410 47.368 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco09g0903 Pkinase 3.4e-44 CL0016